Klebsiella quasipneumoniae: AVR78_12865
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Entry
AVR78_12865 CDS
T04389
Name
(GenBank) ATP-dependent RNA helicase RhlE
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
kqu
Klebsiella quasipneumoniae
Pathway
kqu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
kqu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AVR78_12865
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
kqu03019
]
AVR78_12865
Enzymes [BR:
kqu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
AVR78_12865
Messenger RNA biogenesis [BR:
kqu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
AVR78_12865
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
HI1480
P-loop_SecA
DUF6482
Motif
Other DBs
NCBI-ProteinID:
AMR15180
UniProt:
A0A169BLG9
LinkDB
All DBs
Position
213520..214875
Genome browser
AA seq
451 aa
AA seq
DB search
MSFDSLGLNPDILRAVAEQGYVEPTPIQQQAIPAVLQGRDLMASAQTGTGKTAGFTLPLL
QRLIQNEPHAKGRRPVRALILTPTRELAAQVGENVRDYSKYLNIRSLVVFGGVSINPQMM
KLRGGVDILVATPGRLLDLEHQNAVSLDKVEILVLDEADRMLDMGFIHDIRRVLAKLPPR
RQNLLFSATFSDEIKGLAEKLLHNPLEVEVARRNTASEQITQHVHFVDKNRKRELLSQLI
GEGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGGIRVLV
ATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDI
ERLLKKEIPRIAIAGYEPDPSIKAEPIQNGRQQRGGGRGQGQGRGGQGQGRSGQPRSQSS
APRRQDGEAPKARTQDGKPPRRRRPRKPAGE
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
atgtcttttgattcccttggcctgaatcccgatatcctgcgcgctgtcgctgagcagggc
tacgttgagccgacccctatccagcagcaggcgatcccggcggtactgcagggccgcgac
ctgatggccagcgcccagaccggcaccggtaaaacggcgggctttactctgccgctgctg
cagcgcctgatccagaacgagccgcacgcgaagggccgtcgtccggtgcgcgcgctgatc
ctgaccccgacccgcgagctggcggcgcaggtgggcgagaacgtgcgggattacagcaaa
tatctgaatattcgctcgctggtggtgttcggcggcgtgagtatcaacccgcagatgatg
aagctgcgcggcggcgtcgatatcctcgtcgccaccccgggccgtctgctggacctcgaa
catcagaacgccgtcagcctcgataaagtggaaatcctcgtactggatgaggcggaccgc
atgctggatatgggctttatccatgacatccgccgcgtactggctaaactgccgccgcgt
cggcagaacctgctgttctcggcgaccttctccgacgagatcaaaggcctggcggagaaa
ctgctgcacaacccgctggaagtggaagtggcgcgtcgcaacaccgcctccgagcagatc
acccagcacgtccattttgttgataagaaccgcaagcgcgaactgctgtcgcagcttatc
ggcgaaggcaactggcagcaggtgctggtctttacccgcaccaagcatggcgccaaccac
ctcgcggagcagctcaacaaagacggcatccgcagcgcggcgatccatggcaacaagagc
cagggggcgcgtacccgcgcgctggccgactttaaatccggcggcattcgcgtgctggtg
gcgaccgatatcgccgcccgcggactggatatcgaagagctgccgcacgtggtgaactac
gagctgccgaacgtgccggaagattatgtccaccgtattgggcgtaccggtcgcgcggcg
gccaccggcgaagctttgtcgctggtgtgcgtcgatgagcacaagctgctgcgcgatatc
gagcgcctgctgaaaaaagagattccgcgcatcgcgattgccggctatgagccggacccg
tcgattaaagccgaacctatccagaacggtcgccagcagcgcggcggcggtcgtggtcag
gggcagggacgcggcggccaggggcaggggcgcagcggacagccgcgcagccagagcagc
gccccgcgtcgccaggacggcgaggcgccgaaagcgcgcactcaggacggcaaaccgccg
cgccgccgtcgcccgcgtaagccggctggcgaataa
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