Klebsiella quasipneumoniae: AVR78_20690
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Entry
AVR78_20690 CDS
T04389
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
kqu
Klebsiella quasipneumoniae
Brite
KEGG Orthology (KO) [BR:
kqu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
kqu03016
]
AVR78_20690
Enzymes [BR:
kqu01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
AVR78_20690
Transfer RNA biogenesis [BR:
kqu03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
AVR78_20690
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
RNAseD_HRDC_C
HRDC
Motif
Other DBs
NCBI-ProteinID:
AMR16609
LinkDB
All DBs
Position
complement(1794731..1795858)
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AA seq
375 aa
AA seq
DB search
MNYQMITTDDGLRAVCEAASAASAVALDTEFVRTRTYYPQLGLLQLFDGRQVSLIDPLTI
TDWAPMRELLLNPDVTKYLHAGSEDLEVFLNAFNLMPQPLIDTQILAAFCGRPMSWGFAS
MVEEYSGVALDKSESRTDWLARPLTERQCEYAAADVWYLLPIASQLMAETDRAGWLSAAL
DECRLMQQRRQEVVDPAEAWRDIGNAWQLRTRQLGCLQLLAEWRLRKARERDLAVNFVVR
EEHLWSVARYMPTSLGELDSLGLSGSEIRFHGKTLISLVEKAQALPESALPAPLQNLIDM
PGYRKAFKDIKALVQEVSAEKGVSAELLASRRQINQLLNWHWQLKTQAAEPELISGWRGE
LMAERLKRLLSDYPR
NT seq
1128 nt
NT seq
+upstream
nt +downstream
nt
ttgaactatcagatgatcaccaccgacgatggcctgcgcgctgtctgcgaagcggcaagc
gccgcctccgccgtcgctctggatacggaatttgtccgtacccgcacctattacccgcag
ctggggctgctgcagctgttcgacggccgccaggtctctctgatcgatcccttgacgatt
accgactgggcgccgatgcgcgagctgctgctcaacccggatgtgaccaaatacctgcat
gccggcagcgaagatttagaagtctttctcaacgcgttcaacctgatgccgcagccgctg
atcgacacccagatcctggcagccttctgcggtcggccgatgtcctggggcttcgcctcg
atggtggaagagtattccggggttgcgctggacaaaagcgaatcccgcaccgactggctg
gcgcgtccgctaaccgagcgtcagtgtgaatatgccgcggccgacgtctggtacctgttg
ccgatcgccagccaattaatggcggagaccgatcgcgcgggctggctatcggcggcactg
gacgaatgccgcctgatgcagcagcgtcgccaggaggtggtcgacccggctgaggcctgg
cgcgatatcggcaacgcctggcagttgcgtacccgccagctgggctgcctgcagctgctg
gcggagtggcgcctgcgcaaagcgcgggagcgcgacctggcggtgaactttgtggtgcgg
gaagagcatctgtggagcgtggcgcgctatatgcccaccagcctcggcgagctcgacagc
ctcgggttgtccggtagcgaaattcgctttcatggcaaaacgctgattagcctggtcgag
aaagcacaggcgctgccggagtcggccctgccggcgccgctgcagaatctgatcgacatg
ccgggctaccgcaaagcctttaaagatattaaagcgctggtgcaggaagtgagcgctgag
aagggcgtaagcgcggagctgctggcgtcgcgtcggcagatcaaccagctgttgaactgg
cactggcagctgaaaacgcaggccgctgagcctgagctgatttccggttggcgtggtgag
ctgatggccgaacggctgaagaggctgttaagcgactatccgcgctag
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