KEGG   Klebsiella quasipneumoniae: AVR78_26285
Entry
AVR78_26285       CDS       T04389                                 
Name
(GenBank) VapC toxin family PIN domain ribonuclease
  KO
K18828  tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-]
Organism
kqu  Klebsiella quasipneumoniae
Brite
KEGG Orthology (KO) [BR:kqu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:kqu03016]
    AVR78_26285
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:kqu02048]
    AVR78_26285
Transfer RNA biogenesis [BR:kqu03016]
 Prokaryotic type
  tRNA degradation factors
   AVR78_26285
Prokaryotic defense system [BR:kqu02048]
 Toxin-antitoxin system (TA system)
  Type II TA system
   VapC-VapB
    AVR78_26285
SSDB
Motif
Pfam: PIN PIN_3
Other DBs
NCBI-ProteinID: AMR17853
LinkDB
Position
pKQPS1:104238..104654
AA seq 138 aa
MNKTYMLDTCICSFIMREQPEAVLKRLEQAVLRGQRIVVSAITYSEMRFGATGPKASPRH
VELVDAFCARLDAILPWDRAAVDATTEIKVALRMAGTPIGPNDTAIAGHAIAAGAVLVTN
NTREFERVPGLVLEDWVR
NT seq 417 nt   +upstreamnt  +downstreamnt
gtgaacaagacctatatgctcgacacctgtatctgctcgttcatcatgcgcgagcagccg
gaagccgtcctgaagcgcctggagcaggcggtgctgcgcggccagcgcatcgttgtctcg
gccatcacttattctgaaatgcgcttcggggccaccggcccgaaggcctccccgcgccac
gtcgagctggtcgacgcgttctgcgcccgcctcgatgccatcctgccctgggatcgcgct
gcggtggacgccaccacggagattaaggtggcgctgcgaatggccgggacgccgatcggc
ccgaacgacacggccattgccgggcacgccatcgccgccggtgccgtgctggtgacgaat
aatacgcgggaatttgagcgggtaccgggtcttgtgctggaagactgggtaagataa

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