Klebsiella quasivariicola: B8P98_02935
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Entry
B8P98_02935 CDS
T05116
Name
(GenBank) DEAD/DEAH family ATP-dependent RNA helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
kqv
Klebsiella quasivariicola
Pathway
kqv03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
kqv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
B8P98_02935
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
kqv03019
]
B8P98_02935
03009 Ribosome biogenesis [BR:
kqv03009
]
B8P98_02935
Enzymes [BR:
kqv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
B8P98_02935
Messenger RNA biogenesis [BR:
kqv03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
B8P98_02935
Ribosome biogenesis [BR:
kqv03009
]
Prokaryotic type
rRNA helicases
B8P98_02935
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
DeaD_dimer
DeaD_C
ResIII
CMS1
DRTGG
Cas3-like_C_2
AAA_22
Motif
Other DBs
NCBI-ProteinID:
ASV18319
UniProt:
A0A223U5M2
LinkDB
All DBs
Position
577762..579693
Genome browser
AA seq
643 aa
AA seq
DB search
MAEFETTFADLGLKAPILEALTDLGYEKPSPIQAECIPHLLDGRDVLGMAQTGSGKTAAF
SLPLLNNIDPELRAPQILVLAPTRELAVQVAEAMTEFSKHMRGVNVVALYGGQRYDVQLR
ALRQGPQIVVGTPGRLLDHLKRGTLDLSKLSGLVLDEADEMLRMGFIEDVETIMAQIPEG
HQTALFSATMPEAIRRITRRFMKEPQEVRIQSSVTTRPDISQSYWTAYGMRKNEALVRFL
EAEDFDAAIIFVRTKNATLEVAEALERNGYNSAALNGDMNQALREQTLERLKDGRLDILI
ATDVAARGLDVERISLVVNYDIPMDSESYVHRIGRTGRAGRAGRALLFVENRERRLLRNI
ERTMKLTIPEVELPNAELLSKRRLEKFAAKVQQQLESSDLDQYRALLAKIQPTAEGEELD
VETLAAALLKMAQGERSLIVPPDAPMRPKREFRDRDDRFERRGDRNDRAPRGDREDRPKR
ERRDVGDMELYRIEVGRDDGVEVRHIVGAIANEGDISSRYIGNIKLFASHSTIELPKGMP
GEVLQHFTRTRILNKPMNMQLLGDAQPRTERRGGGERREGGRGFGGERREGGRGFGGERR
EGGRGDGRRFSGERREGRAPRRDDASAPRRDDSAGRRRFGGDA
NT seq
1932 nt
NT seq
+upstream
nt +downstream
nt
atggctgaattcgaaaccacttttgcagatctgggcctgaaggctcctatccttgaagcg
ctcaccgatctgggttacgaaaaaccatctccgatccaggctgagtgcattccgcatctg
ctggacggccgcgatgttctgggtatggcccagaccggtagcggtaaaaccgcagcgttc
tctttaccgctgctgaacaacattgatcctgagctaagagcaccgcagattctggtgctg
gcgccgacccgcgagctggcggtacaggttgctgaagcaatgacggaattctctaaacat
atgcgcggcgtgaacgtggttgccctgtacggcggccagcgttatgacgtgcagctgcgc
gccctgcgtcaggggccgcagatcgtcgtcggtaccccgggtcgtctgctggaccacctg
aagcgcggcaccctggacctctctaaactgagcggcctggtactggatgaagcagatgaa
atgctgcgcatgggctttatcgaagacgtagaaaccattatggcgcagatcccggaaggg
catcagaccgcgctgttctccgccaccatgccggaagcgattcgtcgcattacccgccgc
tttatgaaagagccgcaggaagtgcgcattcagtccagcgtcactacgcgtccggacatc
agccagagctactggactgcttacggcatgcgtaaaaacgaagcgctggtgcgtttcctg
gaagcggaagattttgatgcggcgattatcttcgttcgtaccaaaaacgcgaccctggaa
gtggctgaagcgctggagcgtaatggctataacagcgcagcgctgaacggcgacatgaac
caggcgctgcgtgagcagaccctggagcgtctgaaagacggtcgtctggatatcctgatt
gcgactgacgttgcagcccgcggtctggacgttgagcgtatcagcctggtggtgaactac
gacatcccgatggattctgaatcctacgttcaccgtatcggccgtaccggtcgtgccggt
cgtgctggccgcgcgctgctgttcgttgagaaccgcgagcgtcgtctgctgcgcaacatc
gaacgcacaatgaagctgaccattcctgaagtggaactgccgaacgcagagctgctgagc
aagcgtcgtctggaaaaattcgccgcgaaagttcagcagcagctggaaagcagcgatctg
gatcagtaccgtgcgctgctggcgaaaatccagccgacggcggaaggcgaagagctggac
gtggaaacgctggctgctgcgctgctgaagatggctcagggtgaacgttcgctgatcgtt
ccgccggatgcgccgatgcgtcctaagcgtgagttccgtgaccgcgacgatcgcttcgag
cgtcgtggcgaccgtaacgatcgcgctccgcgcggcgatcgcgaagatcgtccgaagcgt
gagcgtcgtgacgtaggtgatatggaactgtatcgcattgaagtgggtcgcgatgacggc
gttgaagtacgtcatatcgttggcgcgattgccaatgaaggcgatatcagcagccgttac
atcggtaacatcaagctgttcgcttctcactccactatcgaactgccgaaagggatgccg
ggcgaagtgctgcagcactttactcgtacccgcatcctgaacaaaccgatgaacatgcag
ctgctgggcgatgcgcagccgcgcactgaacgtcgtggcggcggtgagcgtcgtgaaggc
ggtcgtggcttcggcggtgagcgtcgtgaaggcggccgtggcttcggtggtgagcgtcgt
gaaggcggtcgtggtgatggtcgtcgtttcagcggcgaacgtcgtgaaggccgtgcgccg
cgtcgtgatgatgcatccgcgccgcgccgtgatgactctgccggtcgccgtcgcttcggt
ggcgatgcgtaa
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