Klebsiella quasivariicola: B8P98_04185
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Entry
B8P98_04185 CDS
T05116
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
kqv
Klebsiella quasivariicola
Pathway
kqv03410
Base excision repair
kqv03430
Mismatch repair
kqv03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
kqv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
B8P98_04185 (recJ)
03430 Mismatch repair
B8P98_04185 (recJ)
03440 Homologous recombination
B8P98_04185 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
kqv03400
]
B8P98_04185 (recJ)
DNA repair and recombination proteins [BR:
kqv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
B8P98_04185 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
B8P98_04185 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
B8P98_04185 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
Motif
Other DBs
NCBI-ProteinID:
ASV18549
UniProt:
A0A223U6A4
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All DBs
Position
822732..824465
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AA seq
577 aa
AA seq
DB search
MKQQIQLRRREAVDGVELPAGLPPLLQRLYASRGVRSAQELERSVKGMLPWTQLTGVEKA
VEMLHDAFLKGLHIVVVGDFDADGATSTALSVLALRALGYNNVSYLVPNRFEDGYGLSPE
VVDQAHARGAQMIMTVDNGISSHAGVDHAHALGIPVLVTDHHLPGDTLPAAEAIVNPNLR
DCDFPSKSLAGVGVAFYLMLALRTFLRDKGWFEARGIAAPNLAELLDLVALGTVADVVPL
DANNRILTWQGLSRIRAGKCRPGIKALLEISNRDPQKLAASDLGFALGPRLNAAGRLDDM
SVGVALLLCDNIGEARVLANELDALNQTRKEIEQGMQAEALTLCQQLERSADTLPGGLAM
YHPQWHQGVVGILASRIKERFHRPVIAFAPTGDGTLKGSGRSIQGLHMRDALERLDTLYP
GLILKFGGHAMAAGLSLEEARFDEFQQRFGELVTEWLDPALLQGEVVSDGPLTAAEMSME
VAQMLRDAGPWGQMFPEPLFDGRFRLLQQRLVGERHLKVMVEPVDGGPLLDGIAFNVDTS
IWPDNGVREVQLAYKLDINEFRGNRSLQLIIDHLWPN
NT seq
1734 nt
NT seq
+upstream
nt +downstream
nt
gtgaaacaacagatacaactacgccgccgcgaggcggttgacggcgtcgaactccccgcc
ggcctgccgccgctactgcagcggctgtatgccagccggggggtgcgcagcgcgcaggag
ctggagcgcagcgtcaaaggcatgctgccgtggacgcagcttaccggcgttgaaaaagcg
gtcgagatgctgcatgacgcgttcctgaaaggattgcatattgtggtggtcggcgatttt
gacgccgatggcgccaccagcaccgcgctaagcgtactggccctgcgcgcactgggatat
aacaacgtctcctatctggtgccgaaccgctttgaagacggctacggcttaagcccggaa
gtggtcgatcaggcgcacgctcgcggcgcgcagatgatcatgaccgttgataacggcatt
tcgtcacatgccggtgtcgatcacgcccatgcgttgggcattccggtgctggtgaccgat
caccacctgccgggcgatacgctgccggcggcggaggccatcgttaatcccaacctgcgc
gattgcgacttcccgtcgaaatcactggccggggtgggggtggcgttttatctgatgctg
gcgctgcgcactttcctgcgcgataaaggctggtttgaggcccgcggcatcgctgcgcca
aacctcgccgagctgctggatctggtggcgcttggcaccgtcgcggacgtggtaccgctg
gatgctaacaaccgtattctcacctggcaggggttaagccgcattcgcgccggcaaatgt
cggcccggcattaaggcgctactggaaatttccaaccgcgatccgcaaaagctggcggcc
agcgacctcggttttgccctcgggccgcgcctgaacgcggcgggacggctggatgatatg
tcggtcggcgtggcgctgctgctatgcgataacatcggcgaagcgcgggtgctggccaac
gagctcgacgcgctcaaccagacgcgcaaagagattgagcaggggatgcaggccgaagcg
ctaacgctctgtcagcagctggagcgcagcgccgatactctgcccggcggactggcgatg
taccatccccagtggcaccagggcgtcgttggcattctggcatcacgcattaaagagcgc
ttccatcgcccggttatcgcttttgcgcccaccggcgacggcacgctgaaaggctccggt
cgctccattcaggggttgcatatgcgcgatgcgctggagcgccttgatacgctttatcct
gggctaatcctgaagttcggcggccacgcgatggcggcggggctttcgctggaagaggcg
cgttttgacgagtttcaacagcgcttcggcgagctggtgaccgaatggctggatcccgca
ttattgcagggcgaagtggtctccgacggcccgctgacggcggcggagatgagcatggaa
gtggcgcagatgctgcgcgatgccgggccatgggggcagatgttcccggaaccgctgttt
gacggtcgcttccgcctgctgcagcagcggctggtgggcgagcgccacctgaaggtgatg
gtcgagccggttgacggcggcccgctgctggacggtatcgccttcaacgttgatacttcc
atctggcccgacaacggcgtgcgtgaagtccagttagcctacaagctcgacatcaacgag
ttccgcggcaaccgcagcctgcagctgatcatcgatcacctctggccaaattga
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