Klebsiella quasivariicola: B8P98_06885
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Entry
B8P98_06885 CDS
T05116
Name
(GenBank) ATP-dependent RNA helicase SrmB
KO
K05590
ATP-dependent RNA helicase SrmB [EC:
5.6.2.7
]
Organism
kqv
Klebsiella quasivariicola
Brite
KEGG Orthology (KO) [BR:
kqv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
kqv03009
]
B8P98_06885
Enzymes [BR:
kqv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
B8P98_06885
Ribosome biogenesis [BR:
kqv03009
]
Prokaryotic type
rRNA helicases
B8P98_06885
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
AAA_22
Cas3-like_C_2
CMS1
CoA_binding_2
Motif
Other DBs
NCBI-ProteinID:
ASV19029
UniProt:
A0A223U7N2
LinkDB
All DBs
Position
complement(1348472..1349803)
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AA seq
443 aa
AA seq
DB search
MTVTTFSELELDENLLEALQDKGFTRPTAIQAAAIPPALDGRDILGSAPTGTGKTAAYLL
PALQHLLDFPRKKSGPPRILILTPTRELAMQVADHARELAKHTHLDIATITGGVAYMNHA
EVFSENQDIVVATTGRLLQYIKEENFDCRAVETLILDEADRMLDMGFAQDIETIAGETRW
RKQTMLFSATLEGDAIKDFAERLLEEPVEVSANPSTRERKKIHQWYYRADDIEHKTKLLV
NLLQQPEATRAIVFVRKRERVHELANWLREAGINTCWLEGEMVQAKRNEAIKRLTDGRVN
VLIATDVAARGIDIPDVSHVFNFDMPRTADTYLHRIGRTGRAGKKGTAISLVEAHDHLLL
GKIGRYIEEPLKARVIDELRPTTRAPSEKLTGKPSKKVLAKRAQKKKDEKEKPRVKKRHR
DTKNIGKRRKPSAAETPSASNEE
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atgactgtaacgactttttccgaacttgaactcgacgaaaacctgctggaagccctccag
gataaaggtttcactcgcccgacagccattcaggccgccgctattccgcctgcgctcgat
ggccgtgacattctcggttcagcgccgaccggcaccggtaaaacggcggcgtatctgctg
ccagcgttgcagcacctgctcgatttcccgcgtaagaaatccggcccgccgcgaattctt
atcctgacgccaacccgtgagctggcgatgcaggtggctgaccacgcccgcgagctggcg
aagcatacccatctggatatcgccaccattaccggcggtgtcgcgtacatgaaccacgcg
gaagtgttcagcgaaaaccaggatatcgtggtcgcgaccaccggtcgcctgctgcaatat
attaaagaagagaactttgactgccgcgccgtcgaaaccctgatcctcgatgaagccgac
cgcatgctggacatgggctttgctcaggatatcgaaaccatcgccggtgaaactcgctgg
cgtaagcagacgatgctgttctccgcgacactggaaggcgatgcgattaaagacttcgct
gagcgtctgctggaggagccggtggaagtttccgccaatccgtcgacccgtgagcgtaag
aaaatccaccagtggtactaccgcgccgacgatatcgaacataaaaccaaactgctggtg
aatctgctgcaacagcccgaagccacccgcgctatcgtctttgtgcgtaagcgcgagcgc
gtgcatgagctggccaactggctgcgtgaggccgggattaacacctgctggctggaaggc
gagatggtgcaggccaagcgtaacgaagccatcaagcgcctgaccgacggtcgcgtgaac
gtgctgatcgccaccgacgtcgctgcccgcggtatcgatattccggacgtcagccacgtc
tttaacttcgatatgccgcgtaccgcggatacctacctgcaccgtatcggtcgtaccggc
cgcgccggtaaaaaaggaaccgccatttctctggtagaagcgcatgatcatctgctgctg
ggtaagattgggcgttatattgaagagccgctgaaggccagggtgatcgatgaactgcgc
ccaacgacccgtgcgccaagcgagaaactgaccggtaagccgtcgaagaaagtgctggcg
aagcgcgctcagaagaaaaaagatgaaaaagagaaacctcgggtgaagaagcgccaccgc
gataccaagaatatcggtaagcgccgcaagccaagtgcagccgaaacgccatcagcgtcc
aacgaagagtaa
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