Klebsiella quasivariicola: B8P98_15190
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Entry
B8P98_15190 CDS
T05116
Name
(GenBank) ATP-dependent RNA helicase HrpA
KO
K03578
ATP-dependent RNA helicase HrpA [EC:
5.6.2.6
]
Organism
kqv
Klebsiella quasivariicola
Brite
KEGG Orthology (KO) [BR:
kqv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
kqv03019
]
B8P98_15190
Enzymes [BR:
kqv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
B8P98_15190
Messenger RNA biogenesis [BR:
kqv03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
B8P98_15190
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF3418
OB_NTP_bind
Helicase_C
HA2_C
DEAD
AAA_19
WHD_HA2
AAA_22
nSTAND3
T2SSE
NACHT
nSTAND_NTPase5
ResIII
DUF6145
PhoH
AAA_16
SLFN-g3_helicase
NTPase_1
TsaE
Motif
Other DBs
NCBI-ProteinID:
ASV20532
LinkDB
All DBs
Position
complement(3043685..3047587)
Genome browser
AA seq
1300 aa
AA seq
DB search
MTEQQKITFSQLYQQLDGLMLRDKTRFARRLHGVKKVKNPESQQAILQEMAQEISQAAGK
VLLREAARPAITYPENLPVSQKKQEILEAVRDHQVVIVAGETGSGKTTQLPKICMELGRG
LKGLIGHTQPRRLAARTVANRIAEELQTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLA
EIQQDRLLMQYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSKH
FNNAPIIEVSGRTYPVEVRYRPIVEEADDTERDQLQAIFDAVDELGREGPGDILIFMSGE
REIRDTADALNKLDLRHTEVLPLYARLSNSEQNRVFQPHSGRRIVLATNVAETSLTVPGI
KYVIDPGTARISRYSYRTKVQRLPIEPVSQASANQRKGRCGRVSEGICIRLYSEDDFLSR
PEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITTDEQ
ATAYKLTPMGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPRERPMDKQQA
SDEKHRRFHDKESDFLAFVNLWNYLGEQQKALSSNQFRRQCRVDFLNYLRVREWQDIYTQ
LRQVVKELGLPVNSEPAEYREIHTALLTGLLSHIGMKDADKQEFTGARNARFSIFPGSGL
FKKPPKWTMVAELVETSRLWGRIAARIEPEWVEPVAQHLIKRSYSEPHWERAQGAVMATE
KVTVYGLPIVGARKVNYSQIDPALCRELFIRHALVEGDWQTRHAFFRENLKLRAEIEELE
HKSRRRDILVDDETMFEFYDQRISHDVISARHFDAWWKQASRETPDLLNFEKSMLIKEGA
EQVSKLDYPNFWHQGNLKLRLSYQFEPGADADGVTVHIPLPLLNQVEEAGFEWQIPGLRR
ELIIALIKSLPKPVRRNFVPAPNYAEAFLGRATPLELPLLDSLERELRKMTGVTIDREAW
QWDQVPDHLKITFRVVDDKNKKLQEGRSLQALKDALKGKVQETLSAVADDGIEQSGLHIW
SFGTLAESYEQKRGNYKVKAWPALVDERDSVAIKLFDNPQEQQQAMWRGLRRLLLLNIPS
PIKYLHEKLPNKAKLGLYFNPYGKVLDLIDDCISCGVDKLIDEAGGPVWTEEGFSQLHDK
VRAELNDTVVEIAKQVEQILTAVFNINKRLKGRVDMTMALGLSDIKAQMAGLVYRGFVTG
NGFRRLGDTLRYLQAIEKRLEKMAIDPHRDRAQMLKVESVQQAWQQWLNKLPPNRREDDD
VREIRWMIEELRVSFFAQQLGTPYPISDKRVLQAMEQITP
NT seq
3903 nt
NT seq
+upstream
nt +downstream
nt
atgacagaacaacaaaaaatcaccttctcccagctttatcaacagctcgacggcctgatg
ctgcgcgataagacgcgctttgcccgccgtctgcacggtgtgaagaaggttaaaaatcct
gaatcgcaacaggccattctgcaggagatggcgcaggagataagccaggcagccggtaaa
gtcctgctgcgcgaagcggcgcgcccggcgattacctatccggaaaacctgccggttagc
cagaaaaaacaagaaattctcgaggcggtgcgtgaccaccaggtggtgatcgtcgccggg
gagaccggttcgggcaaaaccacccagttgcctaaaatctgcatggagctggggcgcggg
ctgaaagggctgatcggtcatacccagccgcgtcgcctggcggcgcgaaccgtcgccaac
cgcattgccgaagagctgcaaacggagccgggcggctgtatcggctataaagtccgcttt
agcgatcacgtcagcgacaacactatggtcaagctgatgaccgacggtatcctgctggcc
gagatccagcaggatcgcctgctgatgcagtacgacaccatcattatcgatgaagcgcac
gagcgcagcctgaacatcgattttctgctcggctatctgaaagagctcctgccgcgtcgc
ccggacctgaaaatcatcattacttcggcgaccatcgacccggaacgcttctcaaagcat
ttcaataatgcgcccattatcgaagtctccgggcgaacttacccggtggaagtccgctac
cggccgatagtggaagaggcggacgacaccgagcgcgatcagttacaggcgatttttgat
gcggttgacgaactggggcgcgaagggcccggcgatattctgatctttatgagcggggag
cgggaaatccgcgataccgctgatgcgctgaataagctggatctgcgccataccgaagtg
ctgccgctgtacgcccgcctgtccaacagcgagcagaaccgcgtcttccagccgcacagc
ggccgacgcatcgtgctggcgaccaacgtggcggaaacctcgctgaccgtaccggggatt
aaatacgttatcgatcccggtaccgcgcgtatcagccgctacagctaccgcaccaaggtg
cagcgcctgccgatcgagccggtttcccaggcgtccgccaaccagcgtaagggccgctgc
ggccgcgtctcggaagggatctgtattcgtctttattcggaagacgatttcctgtcgcgc
ccggagtttaccgacccggaaatactgcgtaccaacctggcgtcggtcattctgcagatg
accgccctgggcttaggcgatatcgccgccttcccgtttgttgaagcgccggataagcgc
aatatccaggacggcgtgcgtctgctggaagagttgggcgccatcaccaccgatgagcag
gccaccgcctataagctgacgccgatgggccgccagctcagccagctgccggtggacccg
cgtctggcgcgcatggtgctggaggcacagaagcacggctgcgtgcgggaagcgatgatc
atcacctccgcgctgtcgattcaggacccgcgcgagcggccgatggacaagcagcaggcc
tctgacgagaagcaccgccgcttccacgataaagagtccgattttctcgccttcgtcaat
ctgtggaactaccttggcgagcagcagaaggcgctgtcgtcgaatcagtttcgccgccag
tgccgggtcgattttcttaactatctgcgcgtgcgcgagtggcaggatatctacacccag
ctgcgccaggtggtgaaagagcttggcctgccagtcaacagcgagccggcggaataccgc
gagatccatactgcgctgctgaccggtttgctgtcgcacatcgggatgaaggatgccgat
aagcaggagtttaccggcgcgcgcaacgcccgcttctccatttttccgggctccggcctg
tttaaaaagccgccgaagtggacgatggtggccgagctggtggagaccagccggctgtgg
gggcgcatcgccgcccgcattgagccggagtgggtggagccggtagcgcagcacctgatc
aagcgctcgtacagtgaaccgcactgggagcgggcgcagggtgcggtgatggcgacggaa
aaggtcaccgtctacggcctgccgatcgttggcgcacgcaaggtcaactacagccagatc
gaccccgcgctgtgtcgggagctgtttatccgccacgcgctggtggagggtgactggcag
acacgtcacgctttcttccgcgaaaacctgaagctgcgggcggaaatcgaagagctggag
cataaatcgcgccgtcgcgatatcctggtggatgacgagacaatgttcgagttctacgac
cagcgcatcagtcacgacgtcatctccgcccgtcattttgatgcctggtggaagcaggcc
agccgcgaaaccccggatctgctcaactttgagaaaagtatgctgatcaaggaaggggcg
gagcaggtcagcaagctggactatccgaacttctggcatcagggcaacctcaagctgcgg
cttagctaccagtttgaaccaggcgctgatgccgacggggtgacggtgcatattccgctg
ccgctgctcaaccaggtggaagaggccggctttgaatggcagatccctggcctgcgtcgc
gagctgatcatcgcgctgataaaatcgctgccgaagccggtgcggcgcaatttcgtcccg
gctcccaactatgcggaagcgtttctcggacgggcgacgccgctcgagctgccgctgctc
gattcgctggagcgcgagctgcgtaagatgaccggcgtgaccatcgaccgcgaggcctgg
cagtgggatcaggtgcccgatcacctgaaaatcactttccgggtggtggatgataaaaac
aagaagctgcaggaagggcgctcgctgcaggcgttaaaagacgcgctgaagggcaaagtt
caggagacgctgtcggcggtggccgatgacggcattgagcagagcgggctgcatatctgg
agctttggcacgctggcggaaagttacgaacagaaacgcggcaactataaggtgaaagcc
tggccggcgctggtggatgagcgcgacagcgtggccatcaagctgtttgataatccacag
gaacagcagcaggccatgtggcgcggtctgcgtcgcctgctgctgctcaacatcccgtcg
ccgattaagtatctgcacgagaaactgccgaacaaagccaagcttgggctctactttaac
ccgtacggcaaagtgctggatctgattgacgactgcatctcctgcggcgtggataagctt
atcgacgaggcgggtggtccggtgtggacggaagagggcttcagtcaattgcacgataaa
gtgcgagccgagctcaacgacacggtggtggagatcgccaaacaggtcgagcagatcctc
accgcggtgttcaatatcaacaaacggctgaaaggccgcgtggatatgaccatggcgctg
gggctgtcggatatcaaagcgcagatggcgggtctggtgtatcgcggttttgtcaccggc
aacggtttccgccgtcttggcgatacgctgcgctatctgcaggcgattgaaaagcgtctc
gagaagatggctatcgatccgcaccgcgatcgcgcgcagatgctgaaggtggagagcgtg
cagcaggcgtggcagcagtggctgaataagctgccgccgaaccgccgtgaggacgacgat
gtccgggagatccgctggatgatcgaggagctacgggtgagcttcttcgcccagcagctg
ggcaccccgtatcctatctcggacaagcgtgtgctgcaggcgatggagcagattacgccg
tag
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integrated database retrieval system
