Klebsiella quasivariicola: B8P98_15915
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Entry
B8P98_15915 CDS
T05116
Name
(GenBank) exoribonuclease II
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
kqv
Klebsiella quasivariicola
Brite
KEGG Orthology (KO) [BR:
kqv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
kqv03016
]
B8P98_15915
Enzymes [BR:
kqv01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
B8P98_15915
Transfer RNA biogenesis [BR:
kqv03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
B8P98_15915
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
OB_RNB
S1
CSD2
S1CSD-TOTE-2
PilZ
ODP
OSR1_C
Motif
Other DBs
NCBI-ProteinID:
ASV20667
LinkDB
All DBs
Position
3195166..3197100
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AA seq
644 aa
AA seq
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MFQDNPLLAQLKQQLHSQTPRAEGVVKGTEKGFGFLEVDAQKSYFIPPPQMKKVMHGDRI
VAVIHSEKDRESAEPETLVEPFLTRFVGKVQKKDDRLAIVPDHPLLKDAIPCRAARGVEH
DFKQGDWAVAEMRRHPLKGDRGFYAELTQFITFSDDHFVPWWVTLARHNLEKEAPDGVAT
EMLDEGLTRRDLTALDFVTIDSASTEDMDDALYAESAADGKLLLTVAIADPTAWIAEGSK
LDNAAKVRAFTNYLPGFNIPMLPRELSDDLCSLRANEVRPVLACQMTLAADGTIEDNIAF
FAATIESKAKLAYDDVSDWLEGRGSWQPGSEAIAQQITLLKDVCQRRSEWRQTHALVFKD
RPDYRFVLGEKGEVLDIVAEPRRIANRIVEESMIAANICAARVLRDKLGFGVYNVHTGFD
PANTEQLAALLKTHDVHVDPAEVLTLEGFCKLRRELDAQPTGFLDSRIRRFQSFAEISTE
PGPHFGLGLEAYATWTSPIRKYGDMINHRLLKAIIKGETIARPQDEATVQMAERRRLNRM
AERDVADWLYARFLNDKAGTDTRFAAEIIDVSRGGMRVRLVDNGAVAFIPAPFLHAVRDE
LVCSQENGTVQIKGEVVYKVTDVIDVTIAEVRMETRSIIARPAV
NT seq
1935 nt
NT seq
+upstream
nt +downstream
nt
atgtttcaggataacccgctgctagcgcagcttaaacagcaactgcattcccagacgccg
cgcgcggaaggggtcgttaagggcacggaaaagggctttggcttcctcgaagtggacgct
cagaagagctacttcattccgccgccgcagatgaaaaaagtgatgcatggcgaccgtatc
gtcgcggtgatccattctgaaaaagatcgcgaaagcgccgaaccagaaaccctggttgag
cccttcctgacccgtttcgtcggtaaagtccagaagaaagacgaccgcctcgctatcgtt
cctgaccatccgctgctgaaagacgccattccctgccgcgccgcccgtggcgttgagcac
gatttcaaacagggtgactgggccgtcgccgagatgcgccgtcatcccttaaaaggcgat
cgcgggttttacgcggagctgacccagtttatcacctttagcgacgaccacttcgtcccc
tggtgggtaacgctggcgcgccataatctggaaaaagaggcgccggacggcgtcgccact
gagatgcttgacgaagggctgacccgccgcgatttaaccgccctcgacttcgtcaccatc
gacagcgccagcaccgaagatatggacgatgcgctgtatgctgagtccgccgccgacggc
aaactgctgctgacggtcgccattgccgacccgaccgcctggattgccgaaggtagtaag
ctggataacgccgcaaaagtacgcgcctttaccaactacctgccgggcttcaatattccg
atgctgccgcgcgagctgtcagacgatctgtgctcgctgcgtgccaacgaagtgcgcccg
gtactggcttgtcagatgaccctggcagccgatggcaccattgaagacaacatcgcgttc
tttgccgccaccatcgaatcaaaagccaagctggcctatgacgatgtttctgactggctg
gaaggccgcggcagctggcagccgggcagtgaggcgatcgcccagcaaattacgctgctg
aaggacgtgtgccaacgtcgtagcgaatggcgtcagacccatgcactggtatttaaagac
cgtccggactaccgtttcgtcctcggcgaaaaaggcgaagtgctggacatcgtcgcggaa
ccgcgccgtattgccaaccgcattgttgaagagtcgatgatcgccgccaacatctgtgcc
gcacgcgttctgcgcgacaagctcggcttcggcgtttataacgtccataccggcttcgac
ccggcgaataccgaacagttggccgccctgctgaaaacccacgacgtgcacgtcgacccg
gcggaagtcctgactctcgaagggttctgtaaactgcgccgtgaactggacgctcagccg
accggtttcctcgacagccgcattcgccgcttccagtcgtttgcggaaatcagcaccgag
ccgggtccgcactttggtcttgggcttgaagcttacgccacctggacttcgccgatccgt
aagtatggcgacatgattaaccatcgtctgctgaaggccatcatcaaaggtgagaccatt
gcgcgtccgcaggatgaagccaccgtgcagatggcggagcgccgtcgtcttaaccgcatg
gcggaacgcgatgtcgctgactggctgtatgcccgtttcctcaacgacaaagccgggacc
gatacccgctttgccgcggagattatcgacgtcagccgcggcgggatgcgcgtacgtctg
gtggacaatggcgcggttgcctttattccggccccgttccttcacgccgtacgcgatgaa
ctggtgtgcagccaggagaacggcaccgtgcagatcaagggcgaagtggtttacaaagtc
accgacgttatcgatgtcaccatcgccgaagtccgcatggaaacccgcagcattattgcg
cgtccggcagtctga
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