Klebsiella quasivariicola: B8P98_17825
Help
Entry
B8P98_17825 CDS
T05116
Name
(GenBank) ribonuclease E
KO
K08300
ribonuclease E [EC:
3.1.26.12
]
Organism
kqv
Klebsiella quasivariicola
Pathway
kqv03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
kqv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
B8P98_17825
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
kqv03019
]
B8P98_17825
03009 Ribosome biogenesis [BR:
kqv03009
]
B8P98_17825
Enzymes [BR:
kqv01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.12 ribonuclease E
B8P98_17825
Messenger RNA biogenesis [BR:
kqv03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
B8P98_17825
Ribosome biogenesis [BR:
kqv03009
]
Prokaryotic type
rRNA processing factors
B8P98_17825
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_E_G
RNase_E_G_Thio
PNPase_C
S1
Motif
Other DBs
NCBI-ProteinID:
ASV21017
UniProt:
A0A8B4TX27
LinkDB
All DBs
Position
3535943..3539158
Genome browser
AA seq
1071 aa
AA seq
DB search
MKRMLINATQQEELRVALVDGQRLYDLDIESPGHEQKKANIYKGKITRIEPSLEAAFVDY
GAERHGFLPLKEIAREYFPANYNAHGRPNIKDVLREGQEVIVQIDKEERGNKGAALTTFI
SLAGSYLVLMPNNPRAGGISRRIEGDDRTELKEALASLELPDGMGLIVRTAGVGKSAEAL
QWDLSFRLKHWEAIQKAAESRPAPFLIHQESNVIVRAFRDYLRQDIGEILIDNPKVLELA
RQHIAALGRPDFSSKIKLYTGEIPLFSHYQIESQIESAFQREVRLPSGGSIVIDSTEALT
AIDINSARATRGGDIEETAFNTNLEAADEIARQLRLRDLGGLIVIDFIDMTPVRHQRAVE
NRLREAVRQDRARIQISHISRFGLLEMSRQRLSPSLGESSHHVCPRCSGTGTVRDNESLS
LSILRLIEEEALKENTKEVHAIVPVPIASYLLNEKRAAVSAIESRQGDVRVIIVPNDEMQ
TPHYSVLRVRKGEETSTLSYLLPKLHEEEMALPGEDEPAERKRPEQPALAAFVMPDAPPA
PMPEEPAAAPVAAAAPVAAAAPAQPGLLSRFFSALKNIFSGAEETKPAEVQVEKKAEEKP
ERQQERRKPRTSNRRDRNDRRDNRDNRDNRDARAENNEGREPRESREENRRNRREKQPQN
VETRDVRQTAGDDAEKAKSRDEQQPRRERTRRRNDDKRQAQQEAKAQTREEPVAQETEQE
ERVQTLPRRKPRQLAQKVRIESAVAEQAVESVPEAVVAEVVAPRSEPVKAELPAVVENVA
DHDENGESREANGMPRRSRRSPRHLRVSGQRRRRYRDERYPTQSPMPLTVACASPEMASG
KVWIRYPVVRPQDQQPEEVQDTSVAETVAAPVAAVETVTAAPVTVEPNTMEPVTAEPVVV
EPVVAAEPVVVDTADVVEPAAVEPALQEPVTEAPVVEEPVAIAPVTIDAEPVTVEPEVVQ
TAPVVEAPVVEAPVDVIAPAAKTVVEAPVVDTAPVEPVKAEAPVSQPVVVASHRHATAPM
TRAPAPDYVPEAPRHSSWVRPPFAFDGKGAAGGHSATHTATAEPTRPQPVE
NT seq
3216 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagaatgttaatcaacgcaactcagcaggaagagttgcgcgtcgcccttgttgat
gggcagcgcctgtacgacctggatatcgaaagccccgggcacgaacagaaaaaagcgaac
atctacaaaggcaagatcacccgcattgaacccagccttgaagccgcgtttgtcgattac
ggcgccgagcgtcatggtttcctccccctcaaagaaatcgcccgcgaatacttccccgcc
aattacaatgcgcatggccgtcctaatattaaagacgtcctgcgtgaaggtcaggaagtt
atcgtgcagattgataaagaagaacgcggcaacaaaggcgcggcgctcactacctttatc
agcctggcaggcagctatctggtcctgatgccgaacaacccgcgcgccgggggaatttcc
cgtcgtattgagggtgacgatcgcaccgaactgaaagaagcgctggcgagccttgagctg
ccggacggcatggggcttatcgtgcgcaccgcaggcgtcggcaaatcagccgaagcgctg
cagtgggacctgagcttccgcctgaagcactgggaagccatccagaaagccgctgaaagc
cgccctgccccgttcctgatccaccaggaaagtaacgtcattgttcgtgctttccgcgac
tatctgcgccaggacatcggcgaaatcctgatcgataacccgaaagtgctcgagctggcc
cgccagcatatcgccgcgctgggtcgtccggatttcagcagcaaaatcaaactgtacacc
ggtgaaatcccgctgttcagccattatcagattgaatcgcaaattgagtccgccttccag
cgtgaagtgcgcctgccgtccggcgggtctatcgttatcgacagcaccgaagcgctgacc
gcgatcgatatcaactccgcccgcgccacccgcggcggcgatatcgaagagacggcgttt
aataccaaccttgaagcggctgatgagattgcccgccagctgcgtctgcgcgacctcggc
ggcctgatcgttatcgacttcatcgatatgacgccggttcgccatcagcgtgcggtggaa
aaccgcctgcgtgaagccgttcgccaggaccgcgcgcgcattcaaatcagccatatctcc
cgttttggtctgctggagatgtcccgtcagcgcctgagcccatcgctgggcgagtccagc
catcacgtctgcccgcgctgctccggtaccggtaccgtgcgtgacaacgagtcgctgtcg
ctctctattctgcgtctgattgaagaagaagcgctgaaagagaacaccaaagaagttcat
gccatcgtgccggtgccgatcgcctcttatctgctgaacgaaaaacgtgccgcggtgagc
gccatcgaatcccgtcagggcgatgtacgcgtcattattgtgccaaacgatgaaatgcag
acgccgcattactccgttctgcgcgtgcgtaaaggtgaagaaacctcaacgctgagctat
ctgctgccgaaactgcatgaagaagagatggcgctgcctggcgaagacgaaccggcagag
cgtaaacgtccggaacagcctgctctggccgcctttgtcatgcctgacgcgccgccggcc
ccgatgccggaagagcctgctgccgcgcctgtcgccgcagcggcaccggtcgcggcagcc
gcaccggcacagcctggattgctctctcgcttcttcagcgcgctgaaaaatattttctct
ggcgccgaagagaccaaaccggctgaagttcaggtcgaaaagaaagcggaagaaaaaccg
gagcgtcagcaggagcgccgtaaaccgcgtaccagcaaccgccgcgatcgcaacgatcgt
cgtgacaaccgcgataatcgagataaccgcgacgcccgggctgagaataacgaaggccgt
gagccgcgcgaatcacgtgaagagaatcgtcgtaaccgtcgcgaaaaacagccacagaac
gtggaaacccgtgacgttcgccagaccgcaggcgacgacgccgagaaagcgaaatcccgt
gacgaacagcagccacgtcgcgaacgcactcgccgccgcaatgacgacaaacgtcaggcg
cagcaggaagccaaagcgcaaactcgcgaagagccagttgcgcaggagacagagcaggaa
gaacgtgtgcagaccctgccgcgtcgtaaaccgcgccagctggcccagaaagtgcgcatt
gagtcggccgttgctgaacaggctgtcgagagcgtgccagaagccgttgtggctgaagtg
gtcgctccgcgcagcgagccggtgaaagccgaactgccagcggtagtggaaaacgtggct
gaccacgacgaaaatggcgaatcccgtgaagctaacggtatgccgcgtcgttcacgtcgc
tccccgcgtcatctgcgcgtaagcggtcagcgtcgtcgtcgctatcgtgacgaacgctat
ccgacgcagtcgccgatgccgctgaccgtcgcctgtgcatcgccggaaatggcttctggt
aaagtctggatccgttacccggtggtccgtccgcaggatcagcaaccggaagaggttcag
gacaccagcgtcgcggaaaccgtggcggccccggttgccgccgttgaaaccgttaccgct
gcgccagtgaccgtcgaaccgaacaccatggagccggtaaccgctgagccagtggttgtc
gagccggtcgtcgccgccgaaccggtggtggttgatactgcggacgttgtcgagccagca
gccgtcgagccagcgctgcaggagccggtgaccgaagccccggtggtggaagagcctgtg
gccatcgcgccagtgacgatcgacgccgaaccggtaacggtcgaacctgaagtggtgcaa
acggcgccggtagttgaagcgccagtggttgaagcgccagtcgacgtcatcgcgccggcg
gcaaaaaccgtcgtggaagcgccggtcgtcgacacagcacctgtcgagccggtaaaagcc
gaagccccggtgagtcagccggttgtcgtggcgagtcatcgccatgccactgcgccgatg
acccgcgcgccagcgccggactacgttccggaagcgccgcgccacagcagctgggtgcgc
ccgccgttcgcctttgacggtaaaggcgccgccggtggtcatagcgcgacccataccgcg
accgctgaaccgacccggccacagcccgtcgagtaa
DBGET
integrated database retrieval system
