KEGG   Klebsiella quasivariicola: B8P98_26885
Entry
B8P98_26885       CDS       T05116                                 
Name
(GenBank) ATP-dependent RNA helicase RhlB
  KO
K03732  ATP-dependent RNA helicase RhlB [EC:5.6.2.7]
Organism
kqv  Klebsiella quasivariicola
Pathway
kqv03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:kqv00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    B8P98_26885
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:kqv03019]
    B8P98_26885
Enzymes [BR:kqv01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     B8P98_26885
Messenger RNA biogenesis [BR:kqv03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     B8P98_26885
SSDB
Motif
Pfam: DEAD Helicase_C ResIII ERCC3_RAD25_C AAA_22 CCDC138_C
Other DBs
NCBI-ProteinID: ASV22642
LinkDB
Position
5350768..5352033
AA seq 421 aa
MSKTHLTEQKFSDFALHPAVIEALEKKGFHNCTPIQALALPLTLEGRDVAGQAQTGTGKT
MAFLTSTFHYLLSHPAIADRQVNQPRALIMAPTRELAVQIHADAEPLAQATGLKLGLAYG
GDGYDKQLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIR
WLFRRMPPAAQRLNMLFSATLSYRVRELAFEQMNNAEYVEVEPEQKTGHRIKEELFYPSN
EEKMRLLQTLLEEEWPDRAIVFANTKHRCEDIWGHLAADGHRVGLLTGDVAQKKRLRILD
EFTRGDLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLA
CEEYALNLPAIETYIGHSIPVSKYNPDALMTDLPKPLRLTRARPGNGPRRSGPPRNRRRS
G
NT seq 1266 nt   +upstreamnt  +downstreamnt
atgagcaaaacacatttaacagaacagaagttttccgacttcgccctgcacccggcagtc
attgaagcccttgaaaagaaagggtttcataattgcacacccattcaggccctcgccctt
ccgctgacgctggaaggccgcgatgtcgccgggcaggcgcaaaccggtaccggtaaaacg
atggcgttcctgacgtcaacgtttcattatcttctctctcacccggctatcgccgatcgc
caggttaaccaaccgcgcgcgctaattatggcaccaacgcgtgaactggcggtacagatc
cacgcggatgctgaaccgctggcgcaggccaccggtctgaagctgggtctggcttacggc
ggcgacggctacgacaagcagctgaaagtgctggaaagcggtgtcgatattctgatcggt
accactggtcgtctgatcgattacgcgaaacagaaccacattaacctcggcgcgattcag
gttgtcgtgctggacgaagccgatcgcatgtacgatctcggctttattaaagatatccgt
tggctgttccgtcgcatgccgccggccgcgcagcgtctgaacatgctgttctctgcaacc
ctctcctaccgcgtccgcgaactggcgttcgaacagatgaacaacgccgagtacgtcgag
gtggaaccggagcagaaaaccggccaccgtattaaagaagagctcttctacccttccaac
gaagaaaaaatgcgtctgctgcagacgctgctggaagaagagtggcccgatcgcgccatc
gtctttgccaacaccaagcaccgttgtgaagatatctggggccatcttgccgcggatggt
catcgcgtaggtctgctgaccggcgacgtggcgcagaaaaaacgtctgcgtattctcgac
gaatttactcgtggcgacctcgatattctggtcgcgactgacgttgccgctcgtggcttg
cacattccggccgtgacccacgtctttaactacgatctgccggacgattgcgaagattac
gttcaccgcattggccgtaccggtcgcgctggcgccagcggtcactctatcagcctcgcc
tgtgaagagtatgcgctgaacctgccggcaatcgaaacctatattggtcattccattccg
gtcagtaaatacaatccggacgcgctgatgaccgatttgcctaagccactgcgcctgacc
cgtgcgcgcccaggcaacggcccgcgtcgcagcggcccaccgcgcaatcgtcgtcgttca
ggttaa

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