Kineococcus radiotolerans: Krad_0151
Help
Entry
Krad_0151 CDS
T00562
Name
(GenBank) DNA-(apurinic or apyrimidinic site) lyase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
kra
Kineococcus radiotolerans
Pathway
kra03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
kra00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Krad_0151
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
kra03400
]
Krad_0151
Enzymes [BR:
kra01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
Krad_0151
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
Krad_0151
DNA repair and recombination proteins [BR:
kra03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Krad_0151
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
NFACT_N
zf-FPG_IleRS
Zn_ribbon_TFIIB
Zn_ribbon_FGT1_2
Motif
Other DBs
NCBI-ProteinID:
ABS01642
UniProt:
A6W4A3
LinkDB
All DBs
Position
2166039..2166860
Genome browser
AA seq
273 aa
AA seq
DB search
MPELPEVQSARQVVERGGLFRTIADVDDRDTYACRPHAPGDLRRALVGRTLTAAHRRGKS
MWCDTSGRDGDEGPALGIHLGMSGRIFVSSAGGADLLVGGDYAGPRESPNPVKEEWYRFT
LDFEDGGQLRLFDKRRLGRVRLDPDVDALGPDAELVGREEFRERIGRGSAPLKARLLDQS
VVAGIGNLLADEVLWRARASPLKPAGELRAEELDELRRELRAAIRHAVRHGGVHTGEVVP
HRTAGGHCPRCGAEMVRATVGGRTTWWCSAEQG
NT seq
822 nt
NT seq
+upstream
nt +downstream
nt
gtgccggaactgcccgaggtccagtccgcccgtcaggtcgtcgaacggggcgggttgttc
cgcaccatcgccgacgtcgacgaccgcgacacctacgcgtgccgcccgcacgcgcccggg
gacctgcgccgggcgctggtgggccggaccctcaccgccgcccaccggcgcgggaagtcg
atgtggtgcgacacctccgggcgcgacggggacgagggcccggcgctggggatccacctg
ggcatgagcgggcggatcttcgtgagttccgccgggggcgcggacctgctcgtgggcggg
gactacgcgggcccgcgggagagcccgaacccggtcaaggaggagtggtaccgcttcacc
ctcgacttcgaggacggcgggcagctgcggctcttcgacaagcgccgcctgggccgggtg
cgcctggaccccgacgtcgacgccctcggtcccgacgccgagctcgtgggccgcgaggag
ttccgcgagcgcatcgggcgcggcagcgccccgctgaaggcccggttgctggaccagtcg
gtggtggccgggatcgggaacctgctggccgacgaggtcctgtggcgcgctcgcgccagc
ccgctgaagcccgccggggaactgcgtgcggaggagctcgacgagctgcgccgcgagctg
cgcgccgcgatccgccacgccgtccgccacggcggcgtccacaccggcgaggtggtcccg
caccgcaccgccggcgggcactgcccgcgctgcggggcggagatggtccgcgccacggtc
gggggccgcacgacgtggtggtgctcggcggaacaggggtga
DBGET
integrated database retrieval system
