Kineococcus radiotolerans: Krad_0158
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Entry
Krad_0158 CDS
T00562
Name
(GenBank) DNA-formamidopyrimidine glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
kra
Kineococcus radiotolerans
Pathway
kra03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
kra00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Krad_0158
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
kra03400
]
Krad_0158
Enzymes [BR:
kra01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
Krad_0158
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
Krad_0158
DNA repair and recombination proteins [BR:
kra03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Krad_0158
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
H2TH
Fapy_DNA_glyco
zf-FPG_IleRS
Zn_ribbon_TFIIB
Motif
Other DBs
NCBI-ProteinID:
ABS01649
UniProt:
A6W4B0
LinkDB
All DBs
Position
complement(2160513..2161400)
Genome browser
AA seq
295 aa
AA seq
DB search
MPELPEVEALATFLRERLVGRVVARVEVGALNVLKTYDPPPSALGGLLVAGVVRRGKWLD
VDVDGLHLAVHLSRAGWVRWSDALPAAPLRPGGKNPVALRVRLAPEDDEDPHRPPGFDLT
EAGTQKRLAVHVVRDPAQVPGIATLGPDPLDDAFDEAAFASLLAGSRQQVKGLLRDQSVL
AGVGNAYSDEVLHVARLSPYAIAGKLPAPDVERLYDALRTTLLDAVAAASGKPAKELKDA
KRAGLRVHGRAGLPCPVCGDTVREVSFADRSMQYCATCQTGGKVLADRRLSRLLK
NT seq
888 nt
NT seq
+upstream
nt +downstream
nt
gtgccggaactgcccgaggtcgaagcgctcgccaccttcctgcgcgagcggctcgtgggc
cgggtcgtggcccgcgtcgaggtcggggcgctgaacgtcctcaagacctacgaccccccg
ccgtcggcgctgggcgggttgctcgtcgccggggtggtccggcgcggcaagtggctcgac
gtcgacgtcgacggcctgcacctggccgtccacctgtcccgcgcgggctgggtgcgctgg
tccgacgccctgccggcggcgccgctgcggcccggggggaagaaccccgtcgcgctgcgg
gtccggctcgcccccgaggacgacgaggacccccaccgccccccggggttcgacctcacc
gaggccggcacgcagaagcgcctcgccgtgcacgtcgtccgcgaccccgcgcaggtcccg
ggcatcgccaccctcgggcccgacccgctggacgacgccttcgacgaggccgcgttcgcc
tcgctgctggcggggtcgcgccagcaggtcaagggcctgctgcgcgaccagtcggtgctg
gccggggtgggcaacgcctactccgacgaggtcctgcacgtcgcccggctctccccctac
gccatcgcggggaagctgcccgcgcccgacgtggaacgcctctacgacgcgctgcggacg
acgctgctggacgccgtggccgcggcgagcgggaaacccgcgaaggagctcaaggacgcc
aagcgggcgggtctgcgcgtgcacggccgggcgggtctgccctgcccggtctgcggggac
accgtgcgcgaggtgtcgttcgccgaccggtcgatgcagtactgcgccacctgccagacc
ggcgggaaggtcctggccgaccgcaggctgtcgcgcctgctgaagtga
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