Kineococcus radiotolerans: Krad_0680
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Entry
Krad_0680 CDS
T00562
Name
(GenBank) DNA-directed RNA polymerase, beta subunit
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
kra
Kineococcus radiotolerans
Pathway
kra03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
kra00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Krad_0680
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
kra03021
]
Krad_0680
03400 DNA repair and recombination proteins [BR:
kra03400
]
Krad_0680
Enzymes [BR:
kra01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Krad_0680
Transcription machinery [BR:
kra03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
Krad_0680
DNA repair and recombination proteins [BR:
kra03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
Krad_0680
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_3
RNA_pol_Rpb2_45
RNA_pol_Rpb2_1
HAAS
Motif
Other DBs
NCBI-ProteinID:
ABS02169
UniProt:
A6W5T0
LinkDB
All DBs
Position
complement(1597927..1601442)
Genome browser
AA seq
1171 aa
AA seq
DB search
MEGPLLAASLPASAPNSTYIGNQSPRTVSGRYSFGKIHEPLEVPDLLALQTDSFDWLLGN
KRWQDRVEASTNGGLAVPTTSGLEEIFEEISPIEDFSGSMSLSFRDHRFEPPKYSLDDCK
ERDLTYSAPLFVTAEFINGNTGEIKSQTVFMGDFPLMTDRGTFVINGTERVVVSQLVRSP
GIYFERVPDKTSDRDTWTAKIIPSRGAWLEFEIDKRDTVGVRVDRKRKQSVTVLMKALGW
SESQIREEFADYESMISTLEKDHTSGVEDALLDIYRKLRPGEPPTQEAARNLLDNLYFNP
KRYDLAKVGRYKVNKKLGTEEPLSDSVLSVDDIVRTIKYLVKLHAGEVTMPGVKNGQPVD
VRVEVDDIDHFGNRRLRSVGELIQNQVRTGLSRMERVVRERMTTQDVEAITPQTLINIRP
VVASIKEFFGTSQLSQFMDQTNPLAGLTHKRRLSALGPGGLSRERAGMEVRDVHPSHYGR
MCPIETPEGPNIGLIGSLSSYGRINPFGFIETPYRKIVDGVVSDEVEYLTADEEDAFVIA
QANAPLDADSRFAEARVLVRAKGGETEFVPRDEVDYMDVAARQMVSVATAMIPFLEHDDA
NRALMGANMQRQAVPLVKSEAPLIGTGMEFRAAVDAGDVVVATKAGVATDVSADMITTSN
DDGTSTTYKVAKFRRSNHGTAYNQQVVINEGDRVEVGTVLADGPSTDGGEMALGRNLMVA
FMPWEGHNYEDAIILSQRLVQDDVLSSIHIEEHEVDARDTKLGPEEITRDIPNVAEEVLA
DLDERGIIRIGAEVRDGDLLVGKVTPKGETELTPEERLLRAIFGEKAREVRDTSLKVPHG
ETGTVIGVKVFDRDEGDELPPGVNQLVRVYVANKRKITDGDKLAGRHGNKGVISKILPVE
DMPFLEDGTPVDVILNPLGVPSRMNVGQVLELHLGWIASRGWKIEGQPDWAKLIPEEIRE
APAGSRIATPVFDGAREEEITGLLSSTIPTRDGDRLVGGDGKARLFDGRSGEPFPDPVAV
GYMYILKLHHLVDDKIHARSTGPYSMITQQPLGGKAQFGGQRFGEMEVWALEAYGAAYAL
QELLTIKSDDVLGRVKVYEAIVKGENIPEPGIPESFKVLIKEMQSLCLNVEVLSSDGMAI
EMRDSDEDVFRAAEELGIDLARREPSSVEEV
NT seq
3516 nt
NT seq
+upstream
nt +downstream
nt
gtggaaggaccactcttggctgcctcgcttccagcgtccgcaccgaacagcacctacatc
ggcaaccagtcgccgcgcaccgtctcgggacggtactccttcggcaagatccacgaaccc
ctggaggtccccgacctcctcgccctgcagaccgacagcttcgactggctgctcggcaac
aagcggtggcaggaccgcgtggaggcgtccaccaacggtggcctcgccgtcccgacgacc
tcgggcctggaggagatcttcgaggagatctccccgatcgaggacttctccggctcgatg
tcgctgtcgttccgcgaccaccggttcgagccgccgaagtactccctcgacgactgcaag
gagcgcgacctcacctactccgcgccgctcttcgtcaccgcggagttcatcaacggcaac
accggtgagatcaagtcccagacggtcttcatgggcgacttcccgctcatgaccgaccgc
ggcaccttcgtcatcaacggcaccgagcgcgtcgtcgtgtcgcagctggtccgttccccg
ggcatctacttcgagcgcgtgccggacaagacctccgaccgcgacacctggaccgcgaag
atcatcccctcgcgcggtgcctggctggagttcgagatcgacaagcgcgacaccgtcggc
gtccgcgtcgaccgcaagcgcaagcagtcggtcacggtcctcatgaaggccctgggctgg
agcgagtcgcagatccgcgaggagttcgccgactacgagtcgatgatctccacgctggag
aaggaccacacctccggcgtcgaggacgcgctgctggacatctaccgcaagctgcgcccg
ggcgaaccgccgacgcaggaggccgcgcgcaacctcctcgacaacctctacttcaacccc
aagcgctacgacctcgccaaggtcggccgctacaaggtgaacaagaagctggggaccgag
gagccgctgagcgacagcgtcctctccgtcgacgacatcgtgcgcaccatcaagtacctg
gtgaagctgcacgccggcgaggtcaccatgccgggcgtcaagaacggccagcccgtcgac
gtgcgcgtcgaggtcgacgacatcgaccacttcggcaaccgccgcctgcgcagcgtgggc
gagctcatccagaaccaggtccgcaccggcctgtcccggatggagcgcgtcgtgcgcgag
cgcatgacgacgcaggacgtcgaggccatcacgccgcagacgctcatcaacatccgtccc
gtcgtggcctccatcaaggagttcttcgggaccagccagctctcgcagttcatggaccag
accaaccccctcgcgggtctgacccacaagcgccgcctgtcggcgctgggtccgggcggt
ctgtcccgtgagcgggccggcatggaggtccgcgacgtccacccgtcgcactacggccgc
atgtgccccatcgagacgccggaaggcccgaacatcggcctcatcgggtcgctgtcgtcc
tacgggcgcatcaacccgttcggcttcatcgagaccccctaccgcaagatcgtggacggg
gtcgtctccgacgaggtcgagtacctgaccgccgacgaggaggacgccttcgtcatcgcg
caggccaacgcccccctcgacgcggacagccgcttcgccgaggcccgcgtcctcgtgcgc
gccaagggcggcgagacggagttcgtcccgcgcgacgaggtcgactacatggacgtcgcc
gcgcgccagatggtctcggtcgcgaccgcgatgatcccgttcctcgagcacgacgacgcc
aaccgcgcgctcatgggcgccaacatgcagcgccaggccgtgccgctggtgaagtccgag
gcgccgctcatcggcaccggcatggagttccgcgccgcggtcgacgccggcgacgtcgtg
gtggccaccaaggccggcgtggcgacggacgtgtccgccgacatgatcaccaccagcaac
gacgacggcacctccacgacctacaaggtcgcgaagttccgccgctccaaccacggcacc
gcctacaaccagcaggtcgtcatcaacgagggcgaccgcgtcgaggtcgggacggtgctg
gccgacggcccctccaccgacggcggcgagatggcgctgggacgcaacctgatggtcgcg
ttcatgccgtgggagggtcacaactacgaggacgcgatcatcctgtcgcagcgcctcgtg
caggacgacgtcctctcctcgatccacatcgaggagcacgaggtcgacgcccgcgacacc
aagctcgggcccgaggagatcacccgggacatcccgaacgtggccgaggaggtgctggcc
gacctcgacgagcgcgggatcatccgcatcggcgccgaggtccgcgacggcgacctgctc
gtcggcaaggtcacgcccaagggcgagaccgagctgaccccggaggagcgcctgctgcgc
gcgatcttcggcgagaaggcccgcgaggtccgcgacacctccctcaaggtgccccacggc
gagacgggcaccgtcatcggcgtcaaggtcttcgaccgcgacgagggcgacgagctgccc
ccgggcgtgaaccagctggtgcgcgtctacgtggccaacaagcgcaagatcaccgacggg
gacaagctcgccgggcgccacggcaacaagggcgtcatctccaagatcctgcccgtggag
gacatgccgttcctcgaggacggcacgccggtcgacgtgatcctcaacccgctcggcgtc
ccgagccggatgaacgtcggtcaggtcctggagctgcacctcggctggatcgccagccgc
ggctggaagatcgagggtcagccggactgggcgaagctcatcccggaggagatccgcgag
gcgccggccggctcccgcatcgcgacgcccgtcttcgacggtgcccgcgaggaggagatc
accggtctgctcagctcgacgatcccgacccgcgacggggaccgcctcgtcggcggcgac
ggcaaggcgcggctgttcgacggccgctccggcgagccgttcccggacccggtggcggtc
ggctacatgtacatcctgaagctgcaccacctggtcgacgacaagatccacgcccggtcg
acgggcccgtactcgatgatcacccagcagccgctgggtggtaaggcgcagttcggtgga
cagcgcttcggcgagatggaggtctgggccctggaggcctacggcgccgcctacgccctg
caggagctgctgacgatcaagtccgacgacgtgctgggccgcgtgaaggtctacgaggcc
atcgtcaagggcgagaacatccccgagccgggcatccccgagagcttcaaggtgctcatc
aaggagatgcagtcgctgtgcctgaacgtggaggtcctctcctccgacggcatggccatc
gagatgcgggacagcgacgaggacgtcttccgggcggccgaggaactgggcatcgacctg
gcccggcgcgagccgagcagcgtcgaagaggtctga
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