Kineococcus radiotolerans: Krad_0993
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Entry
Krad_0993 CDS
T00562
Name
(GenBank) exodeoxyribonuclease V, beta subunit
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
kra
Kineococcus radiotolerans
Pathway
kra03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
kra00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Krad_0993
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
kra03400
]
Krad_0993
Enzymes [BR:
kra01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
Krad_0993
DNA repair and recombination proteins [BR:
kra03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Krad_0993
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PDDEXK_1
AAA_30
UvrD_C_2
AAA_22
ResIII
Motif
Other DBs
NCBI-ProteinID:
ABS02481
UniProt:
A6W6P2
LinkDB
All DBs
Position
complement(1286315..1289692)
Genome browser
AA seq
1125 aa
AA seq
DB search
MSAATPAPAVFDLAGPLPVATTVLEASAGTGKTYTIAGLVTRYVAEGVATVDQLLVVTFG
RAATAELRDRVRERLVATRDALADPASARRSRDAVLAHLAADDARAAEHRARLSEALAGF
DTATVATIHEFCRQVLTSLGTAADVDPSATLVEDVDDLVEEVCDDLYLRFAVRPGAGVPP
FDRPTALRIARAAVDRADARIEPPDTLPGSPENLRVRFALGVRREVEARKRSRRVLGFDD
LLTRLRDALTDPVAGPVACERLRRRYSVVLVDEFQDTDAVQWDVLRTAFHGQGPLVLIGD
PKQAIYAFRGADVRSYLDAAGVAGTTATLSTNHRSDPLVLAGTAALLRGAALGEQRIVVR
PVDAAHAAAALVDGSGAPDPAPVRVRVLERDGLPTTGRGLPPVGEARAVVARDTAAQVVA
VLREGLRVRPRDGGERDLEAGDVAVLVRTGAQAALVQEELRRRGVPCVLSRGPSVFATPA
AQEWISLLEAVEQPHRAPRVRRVALSSFVGRSAAELDAAGDRATDELSVQLREWGAVLTE
RGVAGAFAVVGEAHRLPGRLLGVEGGERRLTDLRHIAEVLHRESALNPGGGVSSLLSWLR
ARVEEAAGDADRERSRRLDTDRAAVQIATVHTSKGLEFEVVCVPFGWDAPGGGGSKDRLP
VAHAPDGPRALHVGGPGAPGYAAACRAADTEDLGEELRLLYVAVTRAVSRLLVWWAPSQN
TEEGALHRLLLAEDPLAVPESLPVPGDEVLSSRLASRFPAGGPVAVETVPLRTPEDRLPA
VAAPAAHLAVARFRGAVDLGWRRTSYSGLTRGVHDGPGAGHAVLAGPEVDVTDDEVDLDA
AGATAADDDPRGWRATVSPMADLPAGTGFGTLVHAVLEGFDPAVPDRTAHLAALAREQFD
PQPAEDLALALGPVLRTGLGPLAGGAALEGFPVADRLAELDFEMPLAGGDAAGPAGPRVG
DVAGLLRRHLPPGDPVHRYADALEDPVLGEEGLRGYLTGSIDAVLRRREGGFLVVDYKTN
RLGAPGEILTAWHYRREALDEAVLAAHYPLQALLYCVALHRFLRWRQPGYDPAVHLGGVL
YLFLRGMCGPEVPAGEDGVPPGVWSWRPPAGLVVDLSELLAGRTP
NT seq
3378 nt
NT seq
+upstream
nt +downstream
nt
gtgagcgccgcgaccccggccccggcggtcttcgacctcgccggccccctgccggtcgcc
acgacggtcctggaggccagcgcggggacgggcaagacgtacacgatcgcggggctcgtg
acccgctacgtcgccgagggcgtcgcgaccgtcgaccagctcctcgtcgtcaccttcggg
cgcgcggcgaccgcggagctgcgcgaccgggtccgcgagcggctggtcgccacccgcgac
gccctggccgaccccgcgtcggcccgccgctcgcgcgacgcggtcctcgcccacctggcc
gccgacgacgcccgcgccgccgagcaccgggcccggctctcggaggcgctggccggtttc
gacaccgccaccgtcgccaccatccacgagttctgccggcaggtgctcaccagcctcggc
accgccgccgacgtcgacccgtcggcgacgctggtcgaggacgtcgacgacctcgtcgag
gaggtctgcgacgacctctacctgcggttcgcggtgcgtccgggggcgggggtcccgccc
ttcgaccgccccaccgccctgcgcatcgcccgcgcggccgtcgaccgggccgacgcgcgc
atcgagccccccgacacgctgccggggtccccggagaacctccgggtgcgcttcgcgctg
ggggtgcggcgcgaggtcgaggcccgcaagcgctcccgccgcgtcctcggcttcgacgac
ctcctgacccggttgcgcgacgccctgaccgaccccgtcgccggcccggtggcctgcgaa
cggctgcgccgcaggtactccgtggtcctggtggacgagttccaggacaccgacgcggtg
cagtgggacgtcctgcggaccgcgttccacgggcaggggccgctggtgctcatcggcgac
cccaagcaggcgatctacgccttccgcggggccgacgtccgcagctacctcgacgccgcc
ggggtcgcgggcacgacggccacgctgagcaccaaccaccgcagcgaccccctggtgctg
gcggggacggccgcgctgctgcgcggcgcggccctgggggagcagcggatcgtggtgcgc
cccgtcgacgcggcccacgccgcggcggccctcgtcgacggctccggcgcgccggacccg
gccccggtgcgggtgcgggtgctggagcgcgacgggctgcccaccacgggcagggggctg
ccgccggtcggcgaggcgcgggccgtggtggcccgcgacaccgccgcccaggtcgtcgcg
gtgctgcgggaagggctgcgggtccggccccgcgacggcggcgagcgcgacctggaggcc
ggggacgtggccgtcctggtccgcaccggcgcccaggcggcgctggtgcaggaggagctg
cgccggcgcggggtgccctgcgtgctctcgcgcggccccagcgtcttcgccacccccgcc
gcccaggagtggatctccctgctggaggcggtggagcagccgcaccgggccccgcgggtg
cgccgggtcgcgctgtccagcttcgtggggcgcagcgccgccgagctcgacgcggcgggc
gaccgggccaccgacgagctctcggtgcagctgcgcgagtggggcgcggtgctgaccgag
cgcggggtggcgggggcgttcgccgtcgtcggcgaggcccaccggctgccgggacggctg
ctcggggtcgagggcggtgagcgccgcctcaccgacctgcgccacatcgccgaggtgctg
caccgggagtccgcgctcaaccccggcggcggggtgtcgagcctgctgtcgtggctgcgc
gcccgggtcgaggaggccgccggggacgccgaccgggaacgctcccggcgcctggacacc
gaccgcgccgccgtccagatcgccaccgtgcacaccagcaagggcctggagttcgaggtg
gtgtgcgtcccgttcggctgggacgcccccggcgggggcgggtccaaggaccgccttccc
gtcgcgcacgccccggacgggccgcgcgcgctgcacgtcggggggccgggcgcccccggc
tacgccgccgcctgccgcgccgccgacaccgaggacctcggggaggagctgcgcctgctc
tacgtcgccgtcacccgcgcggtgtcccggctgctggtgtggtgggcgccgagccagaac
acggaggagggggcgctgcaccgcctcctgctggccgaggacccgctggcggtgccggag
tcgctgccggtgcccggcgacgaggtcctgagctcgcgcctggcgtcgcggttcccggcg
ggggggccggtggcggtggagaccgtcccgctgcgcacccccgaggaccggctgcccgcg
gtcgcggcgcccgccgcgcacctggccgtcgcccggttccggggcgcggtggacctcggc
tggcggcgcacctcctacagcggcttgacccgcggggtgcacgacggccccggcgccggg
cacgcggtgctggccggaccggaggtcgacgtcaccgacgacgaggtcgacctcgacgcg
gccggggccaccgccgccgacgacgacccgcgggggtggcgcgcgacggtctcgccgatg
gccgacctgcccgccgggacggggttcgggaccctcgtgcacgccgtgctggagggcttc
gaccccgccgtccccgaccggaccgcccacctggcggcgctggcgcgcgagcagttcgac
ccgcagccggccgaggacctcgccctggccctggggcccgtgctgcgcaccgggctcggg
ccgctggccggcggggccgcgctggaggggttccccgtcgcggaccgcctcgccgagctg
gacttcgagatgccgctggccgggggcgacgcggcgggaccggcggggccgcgggtgggt
gacgtcgcgggcctgctgcgccggcacctgcccccgggggacccggtgcaccgctacgcc
gacgccctggaggacccggtcctgggggaggaggggctgcgggggtacctcaccggctcc
atcgacgccgtcctgcgccggcgcgagggcgggttcctcgtcgtggactacaagaccaac
cgcctcggggcgccgggggagatcctcacggcctggcactaccggcgcgaggccctcgac
gaggcggtgctcgccgcgcactacccgctgcaggccctgctgtactgcgtcgcgctgcac
cggttcctgcgctggcgccagcccggctacgacccggccgtgcacctgggcggggtgctg
tacctgttcctgcgcgggatgtgcgggccggaggtgcccgccggcgaggacggggtgccg
ccgggggtgtggtcgtggcgaccgcccgccgggctcgtcgtggacctgtccgaactgctc
gccgggaggaccccgtga
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