Kineococcus radiotolerans: Krad_0994
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Entry
Krad_0994 CDS
T00562
Name
(GenBank) exodeoxyribonuclease V, alpha subunit
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
kra
Kineococcus radiotolerans
Pathway
kra03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
kra00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Krad_0994
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
kra03400
]
Krad_0994
Enzymes [BR:
kra01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
Krad_0994
DNA repair and recombination proteins [BR:
kra03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Krad_0994
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
Viral_helicase1
AAA_11
UvrD_C_2
RecD_N
AAA_22
Helicase_RecD
UvrD-helicase
SH3_13
TraI_hel_assoc_N
AAA_16
PhoH
UvrD_C
SLFN-g3_helicase
nSTAND3
AAA_28
Terminase_6N
Motif
Other DBs
NCBI-ProteinID:
ABS02482
UniProt:
A6W6P3
LinkDB
All DBs
Position
complement(1284414..1286318)
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AA seq
634 aa
AA seq
DB search
MTTPTTSTGAPAAAATAAVPGADPADRSAHRARGASGLLREFNDLGLLHAADVHVARRLG
AVTGEDDERVLLAVALAVRAVRHGSVVLHLRQVPETVVPEDVEDSGAVGTVAVRWPDPEE
WLAALRRSPLLVEHAPGETTGPAAPLHLVGDGLWLDRYWRQELAVAEDLRARSAAVAGYD
PAAVDAVLDRLWPGGLADDQRTAAAVCLAHGVSVLGGGPGTGKTTTVARLLAAVHALSPG
PPRVALAAPTGKAAARLTEAVVSAAGTDGFTDDERRFLRSTTASTLHRLLGIRPGSVRAR
YDAEHRLPHDVVIVDEASMVGLGVMARLLAALRPGARLVLVGDPQQLASVEVGAVLADLV
APAERAAPGAAPAVPHGVALLRRTHRFADRGGIAAIAAAVRRGAAEEVVDLLRAGGPDVE
FLEVPDEELVAGAALEAVRAEVLRRSAAVVEAARAGDAAAALTALDAHRTLCAHRRGTRG
VSHWSALAQRWAVEDLGVQPRTDGRYVGLPVIVTANDPGVGVFNGDTGVVLDRDGTLVAA
IARGAGPLLVPLARLAAVEPVHAMTVHRSQGSQFDVVTVLAAPERSPLATREMFYTALTR
AKVRVRVVGSPEAVAAAVSRPLARATGLAERLRG
NT seq
1905 nt
NT seq
+upstream
nt +downstream
nt
gtgaccacccccaccacctcgaccggcgccccggcggccgcggccaccgccgcggtcccg
ggggccgaccccgcggaccgctctgcgcaccgggcccgcggggcgagcggtctgctgcgg
gagttcaacgacctcggcctgctgcacgccgccgacgtccacgtcgcccgccgcctcggc
gcggtcaccggcgaggacgacgagcgcgtcctgctcgccgtggccctcgcggtgcgggcc
gtgcgccacggctcggtcgtcctgcacctgcggcaggtgcccgagaccgtcgtgcccgag
gacgtcgaggactccggggcggtggggacggtggccgtgcgctggcccgaccccgaggag
tggctggcggcgctgcggcgcagcccgctgctggtcgagcacgcgcccggggagaccacc
ggccccgccgcgccgctgcacctggtcggcgacgggctgtggctggaccggtactggcgc
caggagctcgccgtcgccgaggacctgcgcgcccgcagcgccgccgtcgccgggtacgac
cccgccgcggtcgacgcggtgctggaccggctctggcccgggggcctcgccgacgaccag
cgcaccgcggccgcggtgtgcctggcccacggggtctccgtcctcggcggcgggccgggc
acgggcaagaccacgacggtggcccggctgctcgccgccgtccacgccctctcgcccggc
ccgccgcgggtggcgctggcggcccccacgggcaaggccgcggcccgcctcaccgaggcc
gtcgtgtccgccgcgggcaccgacgggttcaccgacgacgagcggcgcttcctgcgctcc
accaccgcctccaccctgcaccggctgctggggatccggccggggtccgtgcgggcccgc
tacgacgccgagcaccggctgccgcacgacgtcgtcatcgtcgacgaggcctcgatggtc
gggctgggggtgatggcgcggctgctggcggcgctgcggcccggggcgcggctggtgctg
gtgggcgacccgcagcagctggcctcggtcgaggtcggcgccgtcctggccgacctcgtc
gccccggccgagcgcgcggcccccggtgccgcgcccgcggtcccgcacggggtggcgctg
ctgcggcggacccaccgcttcgccgaccgcggggggatcgccgcgatcgccgcggccgtg
cggcggggggcggcggaggaggtcgtggacctgctgcgggccggcggaccggacgtggag
ttcctcgaggtccccgacgaggagctcgtcgcgggcgccgcgctggaggccgtgcgcgcc
gaggtgctgcgccgctcggccgccgtcgtcgaggccgcccgcgccggggacgccgccgcc
gccctcaccgccctcgacgcccaccggacgctgtgcgcgcaccggcgcgggacccgcggg
gtctcgcactggagcgcgctggcccagcggtgggccgtggaggacctcggggtgcagccg
cgcaccgacggccgctacgtcggcctgcccgtcatcgtcaccgccaacgaccccggcgtc
ggggtcttcaacggcgacaccggggtcgtgctggaccgcgacggcaccctggtcgcggcg
atcgcgcgcggcgcggggccgctgctggtcccgctggcccgcctcgccgcggtcgagccc
gtgcacgccatgaccgtccaccgcagccagggctcccagttcgacgtcgtcaccgtgctc
gcggccccggagcgctccccgctggcgacgcgggagatgttctacacggcgctgacccgg
gccaaggtgcgggtgcgggtcgtgggctcgcccgaggcggtggccgccgcggtcagccgg
ccgctggcgcgcgcgacgggtctcgccgagcggctgcgggggtga
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