Kineococcus radiotolerans: Krad_1255
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Entry
Krad_1255 CDS
T00562
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
kra
Kineococcus radiotolerans
Pathway
kra03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
kra00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Krad_1255
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
kra03021
]
Krad_1255
03019 Messenger RNA biogenesis [BR:
kra03019
]
Krad_1255
Transcription machinery [BR:
kra03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
Krad_1255
Messenger RNA biogenesis [BR:
kra03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
Krad_1255
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATP-synt_ab
Rho_RNA_bind
Rho_N
AAA_25
NACHT
SAP
AAA_22
Spore_III_AA
ResIII
Motif
Other DBs
NCBI-ProteinID:
ABS02743
UniProt:
A6W7F4
LinkDB
All DBs
Position
complement(984366..986456)
Genome browser
AA seq
696 aa
AA seq
DB search
MTDTTDIAATDGATAEAPARRTGSLSALRLPQLQALATELGISGTGRMRKVDLLAAIREQ
QSGAPQRTGRPEAADAPTAAAPAPVTGEIAPVSALNESTPAGSAAETAVSTSAPRTRSRR
AGSSAGAPPAAPPAGEQFTVEVPAQPVAETPAPRSEPTLDDFVGARSERAERPERAERPD
AQDGTPRLSRRERARRDRVREPDQQVELPNMPRRTENPPAEGEGRPERTRSEGRGENREP
REPRADRAERPVERSERVEERPQAAASAGPAVGFDDDDERGGRRGRRNRYRDRKGRRGGR
EGAGAPEIDEQVNEDDVLLPVAGILDVLDNYAFIRTSGYLAGANDVYVSLGQVKKNHLRP
GDAVTGAVRQPREGEQTGARAKFNALVRVDTVNGAAPEQARNRPDFTKLTPLYPQERLRL
ETEPNVLTTRIIDLMSPLGKGQRGLIVAPPKAGKTMVMQAIANAITTNNPECHLMVVLVD
ERPEEVTDMQRTIKGEVIASTFDRPAADHTAVAELAIERAKRLVELGNDVVVLLDSLTRL
SRAYNISAPASGRILSGGVDASALYPPKRFFGAARNVENGGSLTILASALVETGSKADEV
IFEEFKGTGNMEVRLSRQLADKRIFPAVDVPASGTRREEILMSREELATVWKLRRVVTAL
DAQASIELLLDRLKKTRSNLEFLQQVQSSTPLVNKD
NT seq
2091 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgacaccaccgacatcgctgccaccgacggcgcgaccgccgaggcgcccgcgcgc
cgcaccggcagcctctccgccctgcgcctgccccagctgcaggcgctcgccacggagctc
ggcatctccggcaccgggcgcatgcgcaaggtggacctgctcgcggccatccgcgagcag
cagtccggcgccccgcagcgcaccggccgccccgaggccgccgacgcccccaccgccgcg
gctcccgccccggtgaccggggagatcgccccggtctcggcgctgaacgagtccacgccc
gccgggtcggcggccgagaccgccgtgagcacctccgccccgcggacccgctcgcgccgc
gccggctcctccgccggagccccgcccgcggccccgcccgccggtgagcagttcaccgtc
gaggtcccggcccagccggtggccgagacccccgccccgcgcagcgagcccaccctcgac
gacttcgtgggcgcccgctccgagcgcgcggagcgtcccgagcgtgcggagcgtcccgac
gcgcaggacggcaccccgcgcctctcccgccgggagcgcgcccgtcgcgaccgggtgcgc
gagcccgaccagcaggtcgagctgccgaacatgccccgccgcaccgagaacccgcccgcc
gagggcgaggggcgccccgagcgcacccggtccgagggccgcggggagaaccgcgagccg
cgcgaaccccgcgccgaccgcgccgagcggccggtggagcgctccgagcgcgtcgaggag
cgtccccaggccgcggcgagcgccggccccgcggtgggcttcgacgacgacgacgagcgc
gggggccgtcgcggccgccgcaaccgctaccgcgaccgcaagggccgccggggcgggcgc
gagggcgccggtgcccccgagatcgacgagcaggtcaacgaggacgacgtcctgctgccc
gtcgccgggatcctcgacgtgctcgacaactacgcgttcatccgcacctccggctacctc
gccggcgcgaacgacgtgtacgtctccctcggccaggtgaagaagaaccacctgcgcccg
ggcgacgcggtgaccggtgcggtgcgccagccccgcgagggcgagcagaccggggcgcgg
gcgaagttcaacgccctcgtccgcgtcgacaccgtcaacggcgccgcgccggagcaggcg
cgcaaccgcccggacttcaccaagctgacgccgctctacccgcaggagcgcctgcggctg
gagaccgagcccaacgtcctgacgacgcgcatcatcgacctgatgtcgccgctggggaag
gggcagcgcggtctgatcgtcgcgccgccgaaggccggcaagacgatggtcatgcaggcc
atcgccaacgccatcacgaccaacaaccccgagtgccacctcatggtcgtcctggtcgac
gagcggcccgaagaggtcaccgacatgcagcggacgatcaagggtgaggtcatcgcctcc
accttcgaccgccccgccgccgaccacaccgcggtcgccgagctcgccatcgagcgggcc
aagcgcctcgtggagctcggcaacgacgtcgtcgtgctgctggactccctgacccgcctc
tcgcgcgcctacaacatctcggcgcccgccagcggccggatcctctccggcggtgtcgac
gcctcggcgctgtacccgccgaagcgcttcttcggcgccgcccgcaacgtcgagaacggc
ggctcgctgacgatcctggcctccgccctggtggagaccggctcgaaggccgacgaggtc
atcttcgaggagttcaagggcaccgggaacatggaggtgcggctgtcgcgccagctggcg
gacaagcgcatcttccccgcggtcgacgtgccggcctccggcacccgccgcgaggagatc
ctcatgtcccgcgaggagctggcgacggtctggaagctgcgtcgcgtcgtcaccgcgctc
gacgcgcaggcctccatcgagctgctgctggaccggctcaagaagacccgcagcaacctc
gagttcctgcagcaggtccagtccagcaccccgctggtcaacaaggactga
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