Kosakonia radicincitans: A3780_01260
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Entry
A3780_01260 CDS
T04579
Symbol
treR
Name
(GenBank) trehalose operon repressor
KO
K03485
LacI family transcriptional regulator, trehalose operon repressor
Organism
krd
Kosakonia radicincitans
Brite
KEGG Orthology (KO) [BR:
krd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
krd03000
]
A3780_01260 (treR)
Transcription factors [BR:
krd03000
]
Prokaryotic type
Helix-turn-helix
LacI family
A3780_01260 (treR)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LacI
Peripla_BP_3
Peripla_BP_1
HTH_3
HTH_31
HTH_23
HTH_IclR
HTH_7
Peripla_BP_4
MarR_2
HTH_Tnp_ISL3
AAA_18
HTH_AraC
CENP-B_N
HTH_Crp_2
HTH_26
MarR
HTH_28
HHH
TrmB
Motif
Other DBs
NCBI-ProteinID:
APG16254
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Position
complement(269271..270218)
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AA seq
315 aa
AA seq
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MQNRLTIKDIARLSGVGKSTVSRVLNNESGVSQRTREKVEAIVNQHGFSPSRSARAMRGQ
SDKVVAIIVSRLDSLSENLAVQTMLPAFYEQGYDPIMMESQFSPELVGEHLQMLSHRNID
GVVLFGFTGITEELLASWQSSLVLLARDANGFSSVCYDDEGAIELLMEKLYAQGHRHISF
IGVPHSDVTTGKRRHDAYLACCQQYQLEPLSVLPGLAMKHGYDHVAEVLTPQTTALLCAT
DTLALGASKYLQQQRIENLQLASVGNTPLMKFLHPEIVTVDPGYAQAGRQAAAQLIEQVN
GRADLRQIVIPARLA
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaaccggctgacaatcaaagacattgcgcgcttaagcggggtggggaaatccacc
gtctcccgcgtgctgaataatgaaagcggcgtgagccagcggacacgcgaaaaagtggag
gccatcgtcaatcaacacggtttctccccttcccgttccgcacgcgccatgcgcgggcaa
agcgacaaagtagtggcgattatcgtctcgcgtctcgattccctgtcggaaaaccttgcg
gtacagaccatgctccccgccttctacgaacagggttacgacccgatcatgatggagagc
cagttttcgccggaactggtcggcgagcatttgcagatgctgagccaccgcaatattgac
ggcgtcgtgctgtttggttttaccggtattaccgaagagctgctggcctcctggcagtca
tcgttggtactgctggcgcgcgacgcgaacggtttttcttcggtttgttacgacgacgaa
ggcgccattgagctattaatggaaaaactctacgctcagggccatcgccatatcagcttt
atcggcgtgccgcacagcgatgtcacgaccggcaaacgccgccacgatgcttatctggca
tgctgccagcaataccagcttgaaccactctctgtgctgcctggtcttgctatgaagcat
ggttacgaccatgttgctgaggtgctgacgccgcaaaccaccgcgctactgtgcgctacc
gatacgctggcgcttggtgccagcaaatacttgcagcaacagcgcatcgaaaacctgcaa
cttgccagcgtcggtaatacgccgttgatgaagtttttgcatccggaaattgttaccgtc
gatcccggctatgcccaggctggccgccaggccgctgcccagttaatagaacaagttaat
ggtcgcgctgatttacggcaaattgtgatccccgccagactcgcctga
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