Kosakonia radicincitans: A3780_01555
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Entry
A3780_01555 CDS
T04579
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
krd
Kosakonia radicincitans
Pathway
krd00300
Lysine biosynthesis
krd00470
D-Amino acid metabolism
krd01100
Metabolic pathways
krd01110
Biosynthesis of secondary metabolites
krd01120
Microbial metabolism in diverse environments
krd01230
Biosynthesis of amino acids
Module
krd_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
krd00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
A3780_01555
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
A3780_01555
Enzymes [BR:
krd01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
A3780_01555
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
DUF7070
Motif
Other DBs
NCBI-ProteinID:
APG16310
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All DBs
Position
complement(326330..327511)
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AA seq
393 aa
AA seq
DB search
MTPKVREALQQLQQQRSEPFCAYVYDLVALRQHIRSMCHALPAGCELFYAAKANPEAPIL
RTLCEYVDGFEAASGGELNWLREQVAGKPLIFGGPGKLQSELRQAVQFGVDVLHVESLTE
LRRLQAIALDENRTVAVLLRMNIALEGIGGTRLMMGGKPTPFGLDEHDLPAALREIASSP
QINLRGFHFHLMSHQLDVDNHLALIRLYLDKVRSWCDRWSLNIDLINVGGGIGINYLEPQ
HHFDWTSFCQRLPDVTQFSQAQGWTLRFECGRFIAAACGYYVMEVLDVKKNLGEWFAIGH
GGTHHFRTPAAQSHNHPFSILRREQNAEWIKDERVTLVGQLCTPKDVLARQQPVAALAPG
DWLVFSLAGAYAWNISHQNFLMHSPPEFIWLEN
NT seq
1182 nt
NT seq
+upstream
nt +downstream
nt
atgacgccgaaagtcagagaggcgctgcaacagttgcagcaacagcgctcagagccgttt
tgcgcttatgtgtatgatctcgttgcactacgccagcatatccgcagcatgtgtcatgca
ttaccagcaggttgtgaactgttttacgccgcaaaggcgaatcctgaagcccccatactg
cgtacattatgtgagtacgtcgatggctttgaagcggcatccggtggcgaactcaactgg
ttgcgtgagcaggtggctggtaagccgctgatttttggcggccccggcaagctgcagagt
gaactgcgccaggcggtgcagttcggcgtggacgttttacacgtggagagtttaaccgag
ctgcgtcgtttacaggctatcgcgcttgatgagaatcgaacggtcgccgtactgttgcgg
atgaacattgcgctggaggggatcggcggtacgcgtctgatgatgggaggcaaaccgacg
ccttttggtctcgatgagcatgatctgcccgcggcattacgcgaaatcgccagctctccg
caaatcaatctgcgcggttttcacttccatctgatgtctcatcaactggatgtggataac
catctggcgttgatccgtctgtatctggacaaggttcgctcctggtgcgatcgctggtcg
ctgaacattgacttgattaacgtcggtggtggtatcggtattaactaccttgaaccgcag
catcactttgactggacatctttttgccagcgcctgccagacgtgacgcaattcagccag
gcgcaaggctggacgctgcgctttgagtgtggtcgtttcattgccgctgcctgcggttat
tacgtcatggaagtgctggacgtcaaaaagaatctcggcgaatggtttgcgattggtcac
gggggaacgcaccattttcgcaccccggcggcgcaaagccataaccacccgttcagcata
ttgcgacgtgaacaaaacgctgaatggataaaagatgaacgtgtgacgctggtcgggcaa
ctctgtacgccaaaagatgtactggcgcgccagcagcccgttgccgcgctggcaccgggt
gactggctggtgttcagcctggcgggcgcttacgcctggaacatatcgcaccagaacttc
ctgatgcattccccacctgagtttatttggctcgaaaactga
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