Kosakonia radicincitans: A3780_01970
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Entry
A3780_01970 CDS
T04579
Name
(GenBank) RNA polymerase sigma factor FliA
KO
K02405
RNA polymerase sigma factor FliA
Organism
krd
Kosakonia radicincitans
Pathway
krd02020
Two-component system
krd02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
krd00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
A3780_01970
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
A3780_01970
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
krd03021
]
A3780_01970
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
krd02035
]
A3780_01970
Transcription machinery [BR:
krd03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
A3780_01970
Bacterial motility proteins [BR:
krd02035
]
Flagellar system
Flagellar assembly proteins
Stator
A3780_01970
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r4_2
Sigma70_r3
HTH_23
KORA
HTH_37
Motif
Other DBs
NCBI-ProteinID:
APG16389
LinkDB
All DBs
Position
432361..433053
Genome browser
AA seq
230 aa
AA seq
DB search
MSLTISENLTPRDEARYISTYLPLVNKVVKQLAWQRNSVMGKDDMQQVALMGLLSSLRRY
GHPDTHFSGYAAQRIRGAVLDELRQQDWRPRRLRQKTHKLNDAIREMERELGHTPGFGEL
NARFALSAEEYQQHRLLDTASEVESLDALPAGEATPAALDSRQLEDEEVLSRTLRGAIAS
LDGREQKIFALYYQHEMSQKEIAQLLGLTEARVCQLNKAISQKIQRFLAQ
NT seq
693 nt
NT seq
+upstream
nt +downstream
nt
atgagtttgacaatttcagaaaacctgacgccgcgtgatgaagcgcgctatatcagcact
tacttgccgctggtgaataaagtggtcaaacaattggcctggcagcgaaatagcgtcatg
ggcaaagacgatatgcagcaagttgccctgatgggattgctttcctctttgcgccgttat
gggcatccggatacgcacttttcaggttatgctgcgcagcgtattcgtggcgccgtactg
gatgaattacgtcaacaggactggcgtcctcgtcgtctgcggcaaaagacgcacaaactc
aacgatgctattcgtgaaatggagcgcgagctgggccatacaccagggtttggcgaactg
aatgcgcgctttgccttaagtgcagaagagtatcaacagcatcgtctgctcgacacggcc
agcgaagtggagagccttgatgcactgcctgcaggtgaagcgactccggccgcgctggat
agccgccagctggaagatgaagaggtgctcagccggacattacgcggcgcgatagcaagc
ctcgacgggcgcgagcagaagatctttgcgctctactaccagcatgaaatgagccagaaa
gagatagcccagctccttggcctgacggaagcgcgggtttgccagcttaacaaggcgata
agccagaagattcagcgctttttagcgcagtaa
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