Kosakonia radicincitans: A3780_02470
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Entry
A3780_02470 CDS
T04579
Symbol
carB
Name
(GenBank) carbamoyl phosphate synthase large subunit
KO
K01955
carbamoyl-phosphate synthase large subunit [EC:
6.3.5.5
]
Organism
krd
Kosakonia radicincitans
Pathway
krd00220
Arginine biosynthesis
krd00240
Pyrimidine metabolism
krd00250
Alanine, aspartate and glutamate metabolism
krd01100
Metabolic pathways
krd01110
Biosynthesis of secondary metabolites
krd01240
Biosynthesis of cofactors
Module
krd_M00051
De novo pyrimidine biosynthesis, glutamine (+ PRPP) => UMP
Brite
KEGG Orthology (KO) [BR:
krd00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
A3780_02470 (carB)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
A3780_02470 (carB)
00220 Arginine biosynthesis
A3780_02470 (carB)
Enzymes [BR:
krd01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.5 carbamoyl-phosphate synthase (glutamine-hydrolysing)
A3780_02470 (carB)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
CPSase_L_D3
MGS
ATP-grasp
Dala_Dala_lig_C
ATP-grasp_3
ATPgrasp_Ter
ATP-grasp_4
CoA_binding_2
Radical_SAM
CbiK
BamE
Motif
Other DBs
NCBI-ProteinID:
APG16479
UniProt:
A0AAX2ESV5
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All DBs
Position
531989..535213
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AA seq
1074 aa
AA seq
DB search
MPKRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPEM
ADATYIEPIHWEVVRKIIEKERPDAVLPTMGGQTALNCALELERQGVLEEFGVTMIGATA
DAIDKAEDRRRFDIAMKKIGLDTARSGIAHTMDEALAVAADVGFPCIIRPSFTMGGTGGG
IAYNREEFEEICARGLDLSPTNELLIDESLIGWKEYEMEVVRDKNDNCIIVCSIENFDAM
GIHTGDSITVAPAQTLTDKEYQIMRNASMAVLREIGVETGGSNVQFAVNPKNGRLIVIEM
NPRVSRSSALASKATGFPIAKVAAKLAVGYTLDELMNDITGGRTPASFEPSIDYVVTKIP
RFNFEKFVGANDRLTTQMKSVGEVMAIGRTQQESMQKALRGLEVGATGFDPKVSLDDPEA
LTKIRRELKDAGAERIWYIADAFRAGLSIDGVFNLTNIDRWFLVQIEELVRLEEQVASVG
INGLDADFLRTLKRKGFADARLAKLVGVREAEIRKLRDQYDLHPVYKRVDTCAAEFATDT
AYMYSTYEDECEANPSQDREKIMVLGGGPNRIGQGIEFDYCCVHASLALREDGYETIMVN
CNPETVSTDYDTSDRLYFEPVTFEDVLEIVRVEKPKGVIVQYGGQTPLKLARALEAAGVP
VIGTSPDAIDRAEDRERFQQAVDRLKLKQPANATVTAIEQAIEKAKEIGYPLVVRPSYVL
GGRAMEIVYDEVDLRRYFMTAVSVSNDAPVLLDRFLDDAVEVDVDAICDGEMVLIGGIME
HIEQAGVHSGDSACSLPAYTLSQEIQDVMRQQVQKLAFELQVRGLMNVQFAVKDNEVYLI
EVNPRAARTVPFVSKATGVQLAKVAARVMTGKTLAQQGHTKEIIPPYYSVKEVVLPFNKF
PGVDPLLGPEMRSTGEVMGVGRTFAEAFAKAQLGSNSTMKKYGRALLSVREGDKERVVDL
AAKLLKQGFELDATHGTAIVLGEAGINPRLVNKVHEGRPHIQDRIKNGEYTYIINTTAGR
QAIEDSKLIRRSALQYKVHYDTTLNGGFATAMALNADATEKVISVQEMHAQIRK
NT seq
3225 nt
NT seq
+upstream
nt +downstream
nt
atgccaaaacgtacagacataaaaagtatcctgatccttggcgctggtccgattgttatc
ggccaggcgtgtgagttcgactactccggcgcgcaggcgtgtaaagcgctgcgtgaagag
ggttaccgcgttatcctggtgaactccaacccggcgacgatcatgaccgacccggagatg
gcggacgccacttatatcgagcctatccactgggaagtggtacgcaaaatcatcgaaaaa
gagcgcccggatgccgtgctgccaaccatgggcggtcaaaccgcgctgaactgtgcgctg
gaactggaacgtcagggcgtgctggaagagttcggcgtcaccatgattggcgcgaccgct
gatgcgattgataaagccgaagatcgccgtcgtttcgacatcgcgatgaagaaaatcggt
ctcgacaccgcgcgttccggtatcgcacataccatggacgaagcgctggccgtcgcggct
gacgtgggtttcccgtgcatcatccgtccttcctttaccatggggggcaccggtggcggc
atcgcctataaccgtgaagagtttgaagagatttgcgcccgcgggctggatctctcgcca
accaatgagctgctgattgatgaatcgctgattggctggaaagagtacgagatggaagtg
gtgcgtgataaaaacgataactgcatcattgtctgctccattgaaaacttcgacgccatg
gggatccacaccggtgactccatcaccgtggcgccagcacagaccctgaccgataaagag
taccagatcatgcgtaacgcctcgatggcggtactgcgtgaaatcggggtggaaaccggc
ggctccaacgtacagttcgcggtgaacccgaaaaacggtcgtctgattgtgattgaaatg
aacccgcgcgtatcccgctcttctgcgctggcctcgaaagcgaccggcttcccgattgcg
aaagtggcggccaagctggcggtaggttatacgctggatgaattgatgaacgacatcact
ggcggccgtactccagcgtcgttcgaaccgtccatcgactacgttgtgaccaagattccg
cgcttcaacttcgagaaatttgtcggtgccaatgaccgtctgaccacgcagatgaaatct
gtcggtgaagtgatggccattggccgcacgcagcaggaatcgatgcagaaagcgctgcgc
ggtctggaagtgggcgcaaccggttttgacccgaaagtgagccttgacgatccggaagcg
ctgaccaaaatccgccgcgaactgaaagatgcaggcgcagagcgtatctggtacatcgct
gatgcattccgtgctggtctctccatcgacggtgtgttcaacctgaccaatattgaccgc
tggttcctggtgcagattgaagagctggtgcgtctggaagagcaggttgcttcggtgggc
attaacggtctggacgctgacttcctgcgcaccctgaaacgtaaaggttttgccgatgcg
cgtctggcgaaactggttggcgtgcgcgaagcggaaatccgcaaactgcgcgatcagtac
gatctgcacccggtctacaaacgtgtggatacctgtgcggcagagttcgccacggatacg
gcctatatgtactccacttatgaagatgagtgcgaagctaacccgagccaggatcgcgaa
aaaatcatggtgctgggcggcggtccaaaccgtatcggccagggcattgaattcgactac
tgctgcgtacatgcatcgctggcgctgcgtgaagacggttacgaaaccatcatggttaac
tgtaacccggaaaccgtttcgaccgattacgacacctctgatcgcctctactttgagccg
gtgaccttcgaagacgtgctggaaatcgttcgcgttgagaagccgaaaggcgtcatcgtg
cagtatggcggacagacaccgctgaaactggcgcgtgcgctggaagctgcaggcgtgccg
gttatcggtaccagcccggatgcgattgaccgtgcggaagaccgtgagcgcttccagcag
gcggttgaccgcctgaagctgaaacagccagcgaacgccaccgtcacggcgattgagcag
gctatagaaaaggcgaaagagattggttacccgctggtggtgcgcccatcctacgtgctg
ggcggccgcgcgatggaaatcgtctatgacgaagtcgacctgcgtcgctactttatgacg
gcagtcagtgtttccaacgatgcgccggttctgcttgaccgtttcctcgatgatgcggtg
gaagtggatgtcgatgccatctgcgatggtgaaatggtgctgattggcggcatcatggag
cacatcgaacaagcgggcgttcactccggcgactccgcctgctctctgccggcttacaca
ctgagccaggaaattcaggacgtcatgcgccagcaggtgcagaaactggcgttcgagttg
caggtgcgcggtctgatgaacgtgcagttcgcggtgaaagacaacgaagtttacctgatt
gaggtgaacccgcgtgcggcgcgtaccgtaccgttcgtctccaaagcgaccggcgtgcag
ttagcgaaagtggcggcgcgcgtgatgacaggcaaaacgctggcgcagcagggtcacacc
aaagagatcatcccgccgtactactcagtgaaagaagtggtgctgccgtttaacaagttc
cctggcgttgacccgctgttagggccagaaatgcgctctaccggtgaagtgatgggcgtc
gggcgcaccttcgctgaagcctttgccaaagcgcagctcggcagcaactcgacgatgaag
aaatacggccgcgcactgctctctgttcgcgaaggcgataaagagcgcgtggtggatctg
gcggctaagctgctgaaacagggcttcgagctggatgcaacccacggcacagcgattgtg
ctgggcgaagccggtatcaacccgcgcctggtgaacaaagtgcatgaaggccgtccgcac
attcaggatcgtatcaagaatggcgagtacacctacatcatcaacaccacggcaggccgt
caggcgattgaggattccaaactgattcgccgcagcgcgctgcaatacaaagtgcattac
gacaccacgctgaacggcggcttcgccaccgcgatggcgctgaatgcggatgccaccgag
aaagtgatttccgtgcaggaaatgcacgcgcaaatccgcaagtaa
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