Kosakonia radicincitans: A3780_02970
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Entry
A3780_02970 CDS
T04579
Symbol
mrcB
Name
(GenBank) penicillin-binding protein 1B
KO
K05365
penicillin-binding protein 1B [EC:
2.4.99.28
3.4.16.4
]
Organism
krd
Kosakonia radicincitans
Pathway
krd00550
Peptidoglycan biosynthesis
krd01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
krd00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
A3780_02970 (mrcB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
krd01003
]
A3780_02970 (mrcB)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
krd01011
]
A3780_02970 (mrcB)
Enzymes [BR:
krd01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.28 peptidoglycan glycosyltransferase
A3780_02970 (mrcB)
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
A3780_02970 (mrcB)
Glycosyltransferases [BR:
krd01003
]
Polysaccharide
Bacterial polysaccharide (excluding LPS)
A3780_02970 (mrcB)
Peptidoglycan biosynthesis and degradation proteins [BR:
krd01011
]
Peptidoglycan biosynthesis and degradation
Glycosyltransferase/DD-Transpeptidase (Class A PBP)
A3780_02970 (mrcB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transgly
Transpeptidase
UB2H
PBP1_TM
UvrB_inter
FtsA_C
Motif
Other DBs
NCBI-ProteinID:
APG16572
LinkDB
All DBs
Position
650169..652700
Genome browser
AA seq
843 aa
AA seq
DB search
MAGNDREPIGRKGKPVRPVKEKISRRRLREEEYDDYDDDDEDEEPMPKKGKGKGGKPRGK
RGWFWLLLKIFIVLAVLCAIYGVYLDQKIRARIDGKVWQLPAAVYGRMVNLEPDMAISKN
EMVKLLEATQYRQVTKMTRPGEFTVQAKSIEMIRRPFDFPDSKEGQVRARLTFDGDRLET
IENMDSNRQFGFFRLDPRLITMLSSPNGEQRLFVPRNGFPDLLVDTLLATEDRHFYEHDG
ISFYSIGRAVLANLTAGRTVQGASTLTQQLVKNLFLSSERSYWRKANEAYMALIMDARYS
KDRILELYMNEVYLGQSGDNEIRGFPLASLYYFGRPVEELSLDQQALLVGMVKGASVYNP
WRNPKLALERRNLVLRLLQQQNVIDQELYDMLSARPLGVQPRGGVISPQPAFMQMVRQEL
QAKLGDKVKDLSGVKIFTTFDSVAQDAAEKAAVEGIPALIKQRKLSDLETAMVVVDRYTG
EVRAMVGGATPQFAGYNRAMQARRSIGSLAKPATYLTALSQPNVYRLNTWIADAPISLRL
SNGQVWAPQNDDRRFSGQVMLVDALTRSMNVPTVNLGMAVGLPAVTDTWLKLGAPKDQLT
GMPSMLLGALNLTPIEVAQAFQTIASGGNRAQLSALRSVIAEDGTVLYQSFPQAERAVPA
QAAYMTLWTMQQVVQRGTGRQLGAKYPGLHLAGKTGTTNNNVDTWFAGIDGREVTITWVG
RDNNQPTKLYGASGAMAIYQRYLENQSPIPLDLTPPEDITTMGVDDMGNFVCGGGGSRSL
PVWTTSPETLCQQNQVQPQTGNPFDQSTQPQQQPQQQQPQQQPQQEQKSDGVAGWIKEMF
GSN
NT seq
2532 nt
NT seq
+upstream
nt +downstream
nt
atggcggggaatgaccgcgagccaattggacgtaaggggaaacctgtgcgtccggtgaaa
gaaaaaatcagtcgtcgccgactccgggaagaggagtacgacgattacgacgatgatgat
gaggatgaagaaccgatgccgaaaaaaggtaaaggcaaaggcgggaagccacgcggcaaa
cgcggttggttctggctgctattgaaaattttcatcgttttagccgtgctgtgcgccatt
tatggcgtttatctggatcaaaaaatccgcgcccgtatcgatggcaaagtctggcagttg
ccggctgcggtttatggccgcatggtcaaccttgagccggatatggcgatcagcaaaaac
gaaatggtaaaactgctggaagccacgcagtaccgccaggtgacgaagatgacgcgtccc
ggcgagtttaccgtgcaggcgaaaagcattgagatgatccgccgtccgtttgatttcccg
gacagcaaagaggggcaggtgcgcgcgcgtctaacctttgatggcgatcgtctggaaacc
attgagaacatggacagcaatcgccagttcggtttcttccgtctcgatccgcgtctcatc
actatgctctcttcgccgaacggcgagcagcgtctgttcgtgccgcgtaacggtttcccg
gatctgctggttgatacgctgctggcaaccgaagaccgtcatttctatgaacatgacggt
atcagcttctactccattggccgtgcggtgctggcaaacctgaccgccggacgcacggtg
cagggggcaagtacgctgacgcagcagttggtgaagaacctgttcctgagcagcgaacgg
tcgtactggcgtaaagccaacgaagcctatatggcgctgattatggatgcccgttacagc
aaggatcgtattcttgaactgtatatgaacgaggtttacctcggtcagagcggcgacaac
gagatccgcggtttcccgctggcgagcctctactattttggccgtccggtggaggagctg
agcctcgatcagcaggcgttgctggtgggaatggtgaaaggggcgtcggtttataacccg
tggcgcaacccgaaactggcactggagcgccgtaacttggtgttgcgtctgttgcaacag
caaaacgtcatcgatcaggaactgtatgacatgctgagtgcccgtccgctgggcgtacag
ccgcgcggtggggtgatttcaccgcagccggcgtttatgcagatggtgcgtcaggagttg
caggcgaaactcggcgataaagtgaaagatctctccggcgtgaagattttcacgaccttt
gattctgtcgcgcaggacgcggcagaaaaagctgccgtggaaggtattccggcgctgatc
aagcagcgcaaactgagcgatcttgaaacggcgatggtggtagtagaccgctataccggc
gaggttcgggccatggttggcggcgcgacgccgcagttcgcgggctataaccgcgccatg
caagcgcgccgttccattggttcgctggcgaaaccggcgacctatctgacggcgctgagc
cagccaaatgtgtatcgcctcaatacctggattgccgatgcgccgatctctttgcggttg
tcgaacggccaggtctgggcaccacagaacgatgatcgccgtttcagtggtcaggttatg
ctggtggatgcgctgacacgttcaatgaacgtgccgacggttaatctcgggatggcggtt
ggtctgcctgcggtaacggatacctggctgaaactgggcgcgccaaaagatcagctcacc
ggcatgccgtcaatgctgctcggtgcgctgaacctgacgccgattgaagtggcgcaggcg
ttccagactatcgccagcggcggtaaccgcgcgcagctttccgcactgcgttcagtgatt
gctgaagacggtacggtgctgtatcagagcttcccgcaggccgaacgtgcggtgccggcg
caggcggcgtacatgacgctgtggaccatgcaacaggtggttcagcgcggtacgggacgt
cagttgggcgcgaaatatccgggtctgcatctggccgggaaaaccggtactactaacaat
aacgtcgatacctggtttgccggtatcgacgggcgtgaagtgaccatcacctgggtgggg
cgcgataataaccagccgacgaagctgtatggtgcaagcggcgcgatggcgatttatcag
cgttatctggaaaaccagtcgccgatcccgctggatctgacgccgccggaagacatcacc
acaatgggcgtcgacgacatgggcaactttgtctgcggcggtggcggttcgcgttcactg
ccggtctggacaaccagcccggaaacgctgtgccagcagaatcaggtgcagccgcaaacc
ggcaacccgtttgatcagtcaacgcagccgcagcagcagccgcaacaacagcaacctcag
caacagccacagcaagagcagaaaagcgatggcgtcgcaggttggatcaaagagatgttt
ggcagtaattaa
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