Kosakonia radicincitans: A3780_04260
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Entry
A3780_04260 CDS
T04579
Name
(GenBank) exonuclease subunit SbcD
KO
K03547
DNA repair protein SbcD/Mre11
Organism
krd
Kosakonia radicincitans
Brite
KEGG Orthology (KO) [BR:
krd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
krd03400
]
A3780_04260
DNA repair and recombination proteins [BR:
krd03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
A3780_04260
Archaeal homologous recombinant proteins
A3780_04260
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
SbcD_C
Metallophos
Metallophos_2
ATPgraspMvdD
Citrate_ly_lig
Motif
Other DBs
NCBI-ProteinID:
APG16810
LinkDB
All DBs
Position
complement(928007..929209)
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AA seq
400 aa
AA seq
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MRIIHTSDWHLGQNFYSKSRAAEHDAFLDWLLNAAEQHQVDAIIVAGDIFDTGSPPSYAR
ELYNRFVVKLQQTGCQLVVLAGNHDSVATLNESKEILAYLKTTVVASAGAAPFWLNRRDG
TPGAVFCPVPFLRPRDMVISQAGLSGQEKQQHLLAAITDYYQKQYDAACILRGEQALPII
ASGHLTTVGASKSDAVRDIYIGTLDAFPAENFPPADYIALGHIHRAQKIGGLQHIRYCGS
PIPLSFDETGKRKSVNLVTFSDGKLAEVTALDIPATQPLAVIKGDFAEICRQLEQWRDAS
TDTPVWLDIEIVSQEYLADMQRKIQQVTEDLPVEVLLVRRSREQRERILAGELRETLSEL
KVEEVFARRLAQEEIDEMQTARLQALFSEARQALDAEKEA
NT seq
1203 nt
NT seq
+upstream
nt +downstream
nt
atgcgcattattcacacttcagactggcatttgggtcagaacttttacagcaaaagccgc
gctgcagaacatgacgcctttctcgactggctgctgaatgccgcagagcagcaccaggtg
gacgccattattgttgcaggtgatatctttgataccggttctccgcccagttatgcccgc
gagttatataaccgctttgtggtgaaactccagcaaaccggctgccagttagtggtgctg
gcgggcaaccatgattccgtggcaacgctgaacgaatcaaaagagatcctcgcttacctg
aaaaccaccgtggtcgccagtgccggcgccgcaccattctggctcaatcgccgtgatggc
acacccggcgccgttttctgtccggtaccgtttttacgcccgcgtgacatggtcatcagc
caggccggattatcagggcaggaaaaacagcaacatctgctggcggctattaccgattac
taccagaagcagtatgacgccgcctgcattctgcgcggcgagcaggcgctgccgattatc
gccagcggccatttgaccaccgtcggtgccagcaaaagtgacgccgtacgtgacatctat
atcggcaccctggatgccttcccggcggagaatttcccgccagccgactatattgcgctt
ggacatattcaccgcgcgcagaaaattggcggcctgcagcatattcgctactgcggttca
ccgatcccactgagttttgatgaaaccggaaagcgtaaaagcgtcaatctggtcacgttc
agcgatggcaagctggcggaagttaccgcgctcgacattccggccacgcagccgctggcc
gtaatcaagggtgatttcgccgagatttgccgccagcttgagcagtggcgcgatgcgtcc
accgacacgccagtctggctggatattgaaattgtaagccaagaatatctggctgatatg
caacgtaaaatccagcaagttaccgaagatttgcccgtcgaagtgttgctggtgcgccgc
agccgcgaacagcgggagcggatcctcgccggagagctgcgggaaacgctcagtgaattg
aaagttgaagaggtcttcgcccgccgcctggcgcaggaagagatcgacgagatgcaaacg
gcgcgcctgcaagccttgttcagtgaagcgcgccaggcgctggatgcggagaaagaggca
tga
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