Kosakonia radicincitans: A3780_04480
Help
Entry
A3780_04480 CDS
T04579
Name
(GenBank) 1-deoxy-D-xylulose-5-phosphate synthase
KO
K01662
1-deoxy-D-xylulose-5-phosphate synthase [EC:
2.2.1.7
]
Organism
krd
Kosakonia radicincitans
Pathway
krd00730
Thiamine metabolism
krd00900
Terpenoid backbone biosynthesis
krd01100
Metabolic pathways
krd01110
Biosynthesis of secondary metabolites
Module
krd_M00096
C5 isoprenoid biosynthesis, non-mevalonate pathway
Brite
KEGG Orthology (KO) [BR:
krd00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
A3780_04480
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
A3780_04480
Enzymes [BR:
krd01000
]
2. Transferases
2.2 Transferring aldehyde or ketonic groups
2.2.1 Transketolases and transaldolases
2.2.1.7 1-deoxy-D-xylulose-5-phosphate synthase
A3780_04480
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DXP_synthase_N
Transket_pyr
Transketolase_C
E1_dh
TPP_enzyme_C
Transketolase_N
Motif
Other DBs
NCBI-ProteinID:
APG16853
LinkDB
All DBs
Position
complement(974423..976285)
Genome browser
AA seq
620 aa
AA seq
DB search
MSFDIAKYPTLALVDTTQELRLLPKESLPKLCDELRRYLLDSVSRSSGHFASGLGTVELT
VALHYVYNTPFDQLIWDVGHQAYPHKILTGRRDKIDTIRQKNGLHPFPWRGESEYDVLSV
GHSSTSISAGIGVAVAAAKEGKQRRTVCVIGDGAITAGMAFEAMNHAGDIRPDMLVVLND
NEMSISENVGALNNHLAQLLSGKLYSTLREGGKKVLSGVPPIKELIKRTEEHIKGMVVPG
TLFEELGFNYIGPVDGHDVLGLVQTLRNMRDLKGPQFLHIMTKKGRGYEPAEKDPITFHA
VPKFDPTSGTLPKSSGGMPSYSKIFGDWLCETAAKDDKLMAITPAMREGSGMVEFSRKYP
DQYFDVAIAEQHAVTFAAGLAIGGYKPVVAIYSTFLQRAYDQVIHDVAIQKLPVLFAIDR
AGIVGADGQTHQGAFDISYLRCIPDMVIMTPSDENECRQMLFTGYHYADGPSAVRYPRGN
AVGVPLEPLEKLPIGKGVVKRQGEKLAILNFGTLLPEAQKAAEALNATLIDMRFAKPLDE
ALILETAARHDSLVTLEENAIAGGAGSGVNEVLMAHRKPVPVLNLGLPDFFIPQGTQDEA
RADLGLNAAGIESRIRNWLD
NT seq
1863 nt
NT seq
+upstream
nt +downstream
nt
atgagttttgatatagccaaatacccgacgctggcgctggtagataccacacaagagttg
cgtctgctgccgaaagagagtctgccgaagctgtgcgacgaactgcgtcgctatctgctt
gacagtgtaagccgctccagcgggcacttcgcctccgggcttggcacggtcgaactgacc
gtcgcgttacattacgtctacaacacgccgttcgatcagttaatctgggacgtcggccat
caggcctacccgcataaaattcttaccgggcgtcgtgacaaaatcgacactatccggcag
aaaaacggtctgcatccgttcccatggcgcggcgaaagcgaatacgacgttctcagcgtg
ggtcactcctccacctctatcagcgcgggaattggcgttgccgtcgccgccgccaaagag
ggcaaacagcgccgcaccgtctgcgtcattggcgatggcgcgatcaccgcaggcatggcc
ttcgaagcgatgaatcacgccggtgatatccgcccggatatgctggtggtgctgaacgac
aacgagatgtcgatttccgagaacgtcggcgcgctgaacaatcacctggcgcagttgctc
tccggcaagctctactccaccctgcgcgaaggcggcaaaaaagtgctttccggcgtaccg
ccgatcaaagagttgatcaagcgtaccgaagaacatatcaaaggcatggtcgtgccaggc
accctgtttgaagagctgggctttaactacattggcccggtggacggtcacgatgtgctg
gggctggtgcagaccctgcgcaatatgcgcgatctgaaaggtccgcagttcctgcatatt
atgaccaaaaaagggcgcggctatgagccggccgaaaaagatccgatcaccttccacgcg
gtgccgaaattcgatccgaccagcggtacgctgccgaaaagcagcggcggcatgccgagt
tattcgaagattttcggcgactggctgtgcgaaaccgccgccaaagacgacaagctgatg
gcgatcacgccagcaatgcgtgaaggttccggcatggtcgaattttcacgcaaatatccg
gatcaatattttgatgttgcgattgccgagcagcatgccgtgactttcgcggccgggctg
gcgattggcggctacaaaccggtggtggcgatctactccactttcctgcagcgcgcctat
gatcaggtgatccacgatgtggcgatccagaaactgccggtgctgtttgccatcgatcgc
gccgggattgttggcgccgacgggcagacgcaccagggcgcttttgatatctcctacctg
cgctgtatcccggacatggtcatcatgacgccaagcgatgaaaacgagtgccgccagatg
ctgtttaccggctatcactatgctgatggcccaagcgccgtacgttacccgcgcggcaat
gccgttggcgtaccgctggagccactggagaaactgccgatcggtaaaggcgtggtgaaa
cgccagggcgagaagctggcgattctgaacttcggcacattattgccggaagcgcaaaaa
gccgccgaagccctgaacgccacgcttatcgacatgcgttttgccaaaccgctggacgaa
gcgctgatcctggaaaccgctgcgcgtcatgactcgctggtgacactggaagagaatgct
atcgcaggcggcgcaggcagcggcgtcaacgaagtgctgatggcgcaccgcaaaccggtg
ccggtgctcaatctcggcctgccggatttcttcatcccgcagggtacgcaggatgaagcc
cgcgccgatctggggctgaacgccgcaggcatcgaatcccgcatccgcaactggctcgac
tga
DBGET
integrated database retrieval system
