KEGG   Kosakonia radicincitans: A3780_04590
Entry
A3780_04590       CDS       T04579                                 
Name
(GenBank) DNA-binding protein HU
  KO
K03530  DNA-binding protein HU-beta
Organism
krd  Kosakonia radicincitans
Brite
KEGG Orthology (KO) [BR:krd00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:krd03032]
    A3780_04590
   03036 Chromosome and associated proteins [BR:krd03036]
    A3780_04590
   03400 DNA repair and recombination proteins [BR:krd03400]
    A3780_04590
DNA replication proteins [BR:krd03032]
 Prokaryotic type
  DNA Replication Initiation Factors
   Initiation factors (bacterial)
    A3780_04590
Chromosome and associated proteins [BR:krd03036]
 Prokaryotic type
  Nucleoid associated proteins
   HU (heat unstable protein)
    A3780_04590
DNA repair and recombination proteins [BR:krd03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Supressor
      A3780_04590
SSDB
Motif
Pfam: Bac_DNA_binding HU-HIG HU-CCDC81_bac_2 HU-CCDC81_euk_2 HU-CCDC81_euk_1
Other DBs
NCBI-ProteinID: APG16875
UniProt: A0AAX2ELJ8
LinkDB
Position
1000789..1001061
AA seq 90 aa
MNKSQLIDKIAAGADISKAAAGRALDALIASVTESLKSGDDVALVGFGTFAVKERAARTG
RNPQTGKEITIAAAKVPGFRAGKALKDAVN
NT seq 273 nt   +upstreamnt  +downstreamnt
gtgaacaaatctcagctgattgacaagattgccgcaggtgctgatatttccaaagctgct
gcaggacgtgcgttagatgctttaattgcttctgttactgaatctttgaaatccggggac
gacgtagcactggtaggtttcgggactttcgcggttaaagaacgtgctgcacgcactggc
cgtaacccgcagaccggcaaagaaatcactatcgctgcagctaaagtgccagggttccgc
gcaggtaaagcgctgaaagacgcagtaaactga

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