Kosakonia radicincitans: A3780_06665
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Entry
A3780_06665 CDS
T04579
Symbol
sdhA
Name
(GenBank) succinate dehydrogenase flavoprotein subunit
KO
K00239
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
krd
Kosakonia radicincitans
Pathway
krd00020
Citrate cycle (TCA cycle)
krd00190
Oxidative phosphorylation
krd00650
Butanoate metabolism
krd00720
Other carbon fixation pathways
krd01100
Metabolic pathways
krd01110
Biosynthesis of secondary metabolites
krd01120
Microbial metabolism in diverse environments
krd01200
Carbon metabolism
Module
krd_M00009
Citrate cycle (TCA cycle, Krebs cycle)
krd_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
krd_M00149
Succinate dehydrogenase, prokaryotes
Brite
KEGG Orthology (KO) [BR:
krd00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
A3780_06665 (sdhA)
00650 Butanoate metabolism
A3780_06665 (sdhA)
09102 Energy metabolism
00190 Oxidative phosphorylation
A3780_06665 (sdhA)
00720 Other carbon fixation pathways
A3780_06665 (sdhA)
Enzymes [BR:
krd01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
A3780_06665 (sdhA)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
HI0933_like
GIDA
Pyr_redox_2
DAO
Thi4
BEX
Motif
Other DBs
NCBI-ProteinID:
APG17250
LinkDB
All DBs
Position
1449784..1451550
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AA seq
588 aa
AA seq
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MKLPVREFDAVVIGAGGAGMRAALQISQSGQTCALLSKVFPTRSHTVSAQGGITVALGNT
HEDNWEWHMYDTVKGSDYIGDQDAIEYMCKTGPEAILELEHMGLPFSRLDDGRIYQRPFG
GQSKNFGGEQAARTAAAADRTGHALLHTLYQQNLKNHTTIFSEWYALDLVKNQDGAVVGC
TALCIETGEVVYFKARATVLATGGAGRIYQSTTNAHINTGDGVGMALRAGVPVQDMEMWQ
FHPTGIAGAGVLVTEGCRGEGGYLLNKHGERFMERYAPNAKDLAGRDVVARSIMIEIREG
RGCDGPWGPHAKLKLDHLGKEVLESRLPGILELSRTFAHVDPVKEPIPVIPTCHYMMGGI
PTKVTGQALTVNEKGEDVVIPGLFAVGEIACVSVHGANRLGGNSLLDLVVFGRAAGLHLQ
ESIAEQGALRDASESDIEGALTRLNRWNNNRSGEDPVTIRKALQECMQHNFSVFREGDAM
AKGLEQLKVIRERLKEARLDDTSSEFNTQRVECLELDNLMETAYATAVSANFRTESRGAH
SRFDYPDRDDENWLCHSLYLPETESMTRRSVNMEPKLRPAFPPKIRTY
NT seq
1767 nt
NT seq
+upstream
nt +downstream
nt
atgaaattgccagtcagagaatttgatgctgttgttattggcgcgggcggcgcaggtatg
cgcgcggcgctgcaaatttcccagagcgggcaaacctgtgcgctgctctccaaagttttc
ccaacccgttcccacactgtgtctgcgcagggcggtatcaccgtagccctgggcaatacc
catgaagataactgggaatggcacatgtatgacacggtaaaaggttccgactacatcggt
gaccaggacgcgattgaatatatgtgcaaaaccggcccggaagcgattcttgagctggag
catatgggcctgccgttctcccgtcttgatgatggccgtatctatcagcgtccgtttggc
ggccagtcgaagaacttcggcggcgagcaggcggcgcgtaccgcagcggcagcggaccgt
accggccatgcgctgctgcataccctttatcagcagaacctgaaaaatcacaccaccatc
ttttccgagtggtacgcgctggatctggtgaaaaaccaggatggcgctgtcgtgggctgt
accgcactgtgcatcgaaaccggtgaagtcgtctacttcaaagcccgcgcaaccgtgctg
gcaactggcggcgcaggccgtatttaccagtccaccaccaatgcgcacattaataccggc
gacggcgtgggtatggcgctgcgcgcgggtgtaccggtgcaggatatggagatgtggcag
ttccacccgaccggtatcgccggggcaggggtgctggtaacggaaggctgccgtggtgaa
ggcggctatctgcttaacaaacacggcgagcgctttatggagcgttatgcgccgaacgcc
aaagacctggcgggccgtgatgtggtggcgcgttccatcatgatcgaaatccgtgaaggt
cgcggttgcgacggtccatggggaccgcacgccaaactgaaactcgatcatctgggtaaa
gaagtactcgaatcgcgtctgccggggatcctggaactgtcgcgcaccttcgcacatgtg
gatccggtgaaagagccaattccggtgatcccgacctgccactatatgatgggcggtatt
ccgaccaaagtgaccggccaggcgctgacggtcaacgagaagggcgaagatgtcgtgatc
ccggggctgtttgcggtgggcgaaatcgcctgcgtatcggttcacggcgccaaccgcctg
ggcggtaactcgctgctcgacctggtggtctttggccgtgcagcaggtctgcatttacaa
gaatctatcgctgaacagggcgcgctgcgcgatgccagcgaatcggatatcgaaggggcg
ctcacccgcctcaaccgctggaataacaatcgtagcggcgaagatccggtcaccatccgc
aaagcgctgcaagagtgtatgcagcataacttctcggtgttccgcgaaggtgatgcgatg
gcgaaaggtcttgaacaactgaaagtgatccgcgagcgcctgaaagaggctcgtctggat
gatacgtcgagcgagttcaatacccagcgcgttgagtgcctggagctggataacctgatg
gaaaccgcttacgcaacggctgtttccgcaaacttccgtaccgaaagccgtggcgcgcac
agccgcttcgactatccggatcgtgacgatgagaactggttgtgccacagcctgtatctg
ccagaaacggaatccatgacgcgccgtagcgtgaatatggaaccgaaactgcgtccggcg
ttcccgccgaagattcgtacttattaa
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