Kosakonia radicincitans: A3780_06880
Help
Entry
A3780_06880 CDS
T04579
Name
(GenBank) helix-turn-helix-type transcriptional regulator
KO
K21972
MerR family transcriptional regulator, repressor of blue light- and temperature-responsive genes
Organism
krd
Kosakonia radicincitans
Brite
KEGG Orthology (KO) [BR:
krd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
krd03000
]
A3780_06880
Transcription factors [BR:
krd03000
]
Prokaryotic type
Helix-turn-helix
MerR family
A3780_06880
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MlrA_C
MlrA_helical
MerR_1
MerR
HTH_17
HTH_Tnp_1
HTH_23
Terminase_5
HTH_28
MerR_2
GspH
XPC-binding
Motif
Other DBs
NCBI-ProteinID:
APG17285
LinkDB
All DBs
Position
1489809..1490552
Genome browser
AA seq
247 aa
AA seq
DB search
MAFYSIGEVAERCGINPVTLRAWQRRYGLLRPQRSEGGHRQFDESDIQRIEEIKRWIESG
VSVSKVKALLDENKLAGQAGWTSVQEEMMSTLRQVNPARLQAMLTTLAQQYSAEQFIEDI
IMPVRQRMSLDPNTARVMLSLLDGVLIEYAAAAIAQARSQAAKEALLVAWDNHDRTRLWL
EAWRLSQQGWRIHVLAEPLDSPHPEFFPGQQLFVWTGKPLTRSQLQQLTHWRNQGFTVAI
HPGTKLP
NT seq
744 nt
NT seq
+upstream
nt +downstream
nt
atggcattttacagcattggcgaggttgccgagcgatgcggcattaacccggtcacactg
cgtgcatggcaacgtcgttatggtttgttaaggccacagcgcagcgaaggcgggcaccgt
caatttgatgagtccgacattcagcgtattgaagagatcaaacgctggatcgagagcggt
gtgtccgtcagtaaagtgaaagcgttgctcgatgagaacaagctggcaggccaggccgga
tggacatcggttcaggaagagatgatgtccacgctacggcaggtcaatcctgcccgtttg
caggcgatgctgaccacgctggcgcagcaatactccgcagagcagtttattgaggatatt
atcatgccggtcaggcagcgcatgagcctcgatcccaataccgcgcgcgttatgctcagt
ttgctggatggcgtgctgattgaatatgccgccgcggctatcgcgcaggcacgttcgcag
gcggcgaaagaggcgctgctggtggcctgggacaatcacgatcgtacccgtttgtggctg
gaagcctggcggctttctcagcagggctggcgcattcatgtgcttgccgagccgctcgat
tccccacacccggagttcttccccggccagcagcttttcgtctggacaggaaaaccgctg
acgcgcagtcagttgcagcaactgacgcactggcgcaatcaggggttcactgtcgccatt
catcccgggacgaaacttccctga
DBGET
integrated database retrieval system
