Kosakonia radicincitans: A3780_11545
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Entry
A3780_11545 CDS
T04579
Name
(GenBank) spermidine/putrescine ABC transporter substrate-binding protein
KO
K02055
putative spermidine/putrescine transport system substrate-binding protein
Organism
krd
Kosakonia radicincitans
Pathway
krd02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
krd00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
A3780_11545
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
krd02000
]
A3780_11545
Transporters [BR:
krd02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
A3780_11545
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Ortholog
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GFIT
Motif
Pfam:
SBP_bac_8
SBP_bac_1
SBP_bac_6
Glyco_hydro_62
Phosphonate-bd
Motif
Other DBs
NCBI-ProteinID:
APG18159
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Position
complement(2520842..2521984)
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AA seq
380 aa
AA seq
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MSKKFARSSLCALSMTMMVAHAAEPTEVGKGEGRLDIIAWPGYIERGQTDKQYDWVTAFE
KDTGCAVNVKTAATSDEMVSLMAKGGYDLVTASGDASLRLIMGKRVQPINTALIPNWKTL
DPKLINGAWFNVGGKVYGTPYQWGPNLLMYNTKTFPTPPDSWSVVFVQQNLPDGKTNKGR
VQAYDGPIYIADAALFLKATQPQLGIDDPYQLTEAQYQAVLKTLRDQHLLIHRYWHDTTV
QMSDFKNEGVVASSAWPYQANALKGENQPIATVFPKEGVTGWADTTMLHADAKHPNCAYK
WMNWSLTPKVQGDVAAWFGSLPVVPEGCKASTLLGEQGCETNGYRFFDKIAFWKTPVAEG
GKYVPYSRWTQDYIAIMGGR
NT seq
1143 nt
NT seq
+upstream
nt +downstream
nt
atgagcaagaaatttgcccgcagcagtctgtgtgcgctgagcatgacgatgatggtcgcg
catgccgccgaacccaccgaagtgggaaaaggggaaggtcgtctggatattattgcctgg
ccggggtatatcgaacgcggccagaccgacaagcaatatgactgggttaccgcttttgaa
aaggacactggttgcgcggtgaacgtcaaaaccgccgccacctccgatgaaatggtcagc
ctgatggcgaaaggcggctacgatctggtcaccgcttcaggcgatgcctcgctgcgcctg
attatggggaaacgcgtgcagccgattaatactgcgcttatcccgaactggaaaaccctc
gacccgaaactgattaacggcgcgtggtttaacgtcggcggcaaagtgtatggcacaccg
tatcagtgggggccgaacctgctgatgtataacaccaaaaccttcccgacgccgccggat
agctggtcagtggtgtttgtgcaacaaaacctgccggatggcaaaaccaataaagggcgc
gtacaggcttatgacggcccgatctacatcgccgatgcggcgctgttcctgaaagccacg
cagccgcaactgggcattgacgatccgtaccagctcacggaagcgcaatatcaggcggta
ctgaaaaccctgcgcgatcagcacttactgatccaccgctactggcatgacaccacggta
cagatgagcgacttcaaaaacgaaggcgttgttgcctccagcgcctggccgtatcaggcg
aatgccctgaaaggtgaaaaccagccgatcgccaccgtattcccgaaagagggcgtcact
ggctgggcggataccacgatgctgcatgccgatgcgaaacacccgaactgtgcctacaag
tggatgaactggtcgctgacgccaaaagttcagggcgacgtggccgcctggtttggctcg
ctgccggtggtgccggaagggtgcaaagccagcacgctgctgggtgagcaaggctgcgaa
actaacggttaccgtttctttgacaaaatcgctttctggaaaaccccggttgctgagggt
ggcaaatatgtgccgtacagccgctggacacaggattacatcgccattatgggtggccgt
taa
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