Kosakonia radicincitans: A3780_12645
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Entry
A3780_12645 CDS
T04579
Name
(GenBank) endo-polygalacturonase
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
krd
Kosakonia radicincitans
Pathway
krd00040
Pentose and glucuronate interconversions
krd01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
krd00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
A3780_12645
Enzymes [BR:
krd01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
A3780_12645
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Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_28
Beta_helix
Motif
Other DBs
NCBI-ProteinID:
APG18361
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All DBs
Position
complement(2766230..2767303)
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AA seq
357 aa
AA seq
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MKSGVTLWISHGAMLTANTDPRVYDKNGRCGTLDHKGNGCRPFILFKNSDGGGIVGEGII
DGQGGELMKGEDESWWQLARRAQREGAAQNVPRLIEIDDGSNIIFHGITLRNSPGFHVTL
KNVRNATFWGVRIDTPANARNTDGIDPVSSQNIVIAHSFIRTGDDNVAIKAGAAGPTRHV
LLVDNHFYWGHGMSIGSETVGGVSDIRVRDLTLDGTTSGLRIKSDISRGGMVSDIRYDNV
CMRGNRRPLDFDTHYDAHAIGNNIPVYRDISLSHISGETGQLVLRGYDAVHPLYFALNGV
SFSNAARWLIESAQIRIGPGGVSPVPPGEASVQRSVVSADCAKNWISFPVTDAPSVK
NT seq
1074 nt
NT seq
+upstream
nt +downstream
nt
atgaaatctggcgtcacactctggatttcacatggcgcaatgctcacagcaaatactgac
ccacgtgtttacgacaaaaatgggcgctgtggaacccttgatcataaggggaatggttgt
cggccctttattctttttaagaacagcgacggtggaggtattgtcggggaggggattatt
gatgggcagggcggtgagctgatgaaaggcgaggatgaatcatggtggcagctggctcgc
cgcgcgcagcgagaaggtgcggcgcagaatgtgcctcgcctgattgaaatagatgatggc
tcaaatattatttttcacggcattacgctgcgaaattcacctggattccatgtcaccctg
aagaatgtgcgcaatgcgactttctggggcgtacgtattgatacacccgcaaatgcccgt
aataccgacggcattgatcctgtttcgtcgcagaatatcgttattgctcacagcttcatc
agaaccggtgacgacaatgtggcgattaaagctggcgccgctggacccacgcgccatgta
ctgttagtggataaccatttttattggggacacgggatgtccattggtagcgagacggtg
ggcggtgtcagcgacattcgggtgcgtgatttgacgcttgacggtacgacttcagggctt
cgtatcaaaagtgatatcagccggggcggaatggtcagtgatatccgctacgacaatgtt
tgtatgcgggggaaccggcgcccgctcgactttgatacgcattatgatgcacacgcgatc
gggaacaacattcccgtctaccgtgatatctcgctgagtcatatttccggcgaaaccggc
cagttggtattacgcggttatgatgccgttcatcctttgtattttgccttgaacggtgtc
tctttcagcaatgcggctcgctggctaattgaatcggcgcagatccgcattggcccaggc
ggcgtctcgcctgttccaccgggagaagcatcggtacagcgatcggttgtttctgctgat
tgcgcaaaaaactggatctcttttcccgtgacggatgcgccatccgtaaaatga
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