Kosakonia radicincitans: A3780_12705
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Entry
A3780_12705 CDS
T04579
Name
(GenBank) ABC transporter substrate-binding protein
KO
K02055
putative spermidine/putrescine transport system substrate-binding protein
Organism
krd
Kosakonia radicincitans
Pathway
krd02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
krd00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
A3780_12705
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
krd02000
]
A3780_12705
Transporters [BR:
krd02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
A3780_12705
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_8
SBP_bac_6
SBP_bac_1
SBP_bac_11
Motif
Other DBs
NCBI-ProteinID:
APG18372
UniProt:
A0AAX2ERI3
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All DBs
Position
2777847..2778878
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AA seq
343 aa
AA seq
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MLRKICALTLLTTCVLSAGNAMAADKLIVSTWGGGFKDLIDETIAKEFTKETGVEVQFVT
GGTIDRLNKAKLAGGSPETDVTFTTAHVGYLYANSGLFEKLDMSKIPNAANLVQQAKVSP
YHLGVWGYVYTIGYRPDLVPKGETFTSWNDLWKPELKGTLALPDWDPSHIIAVAAKLSGT
DAAHWQQGQAKLKALIPNIKSFYTDDANSQQLISTGETPVQVMLSMNAYNMMAEGVDVKL
AIPKEGAILGVDTIGINKGTKHSDLAYKFMNIALKPEIQEQVAKIYHGSPTVTNAHIDPE
LAKLPGMLTTPAQWNATINTDPQLRAEKTAEWRQWFSENIMSH
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
atgttgcgtaagatttgtgccttaacgttgttgaccacatgcgtgctcagcgcgggcaat
gcgatggccgctgacaagctgattgtcagcacctggggcggcggttttaaagatttgatc
gatgaaaccattgccaaagagttcaccaaagagaccggcgtagaagtgcagtttgtcacc
ggcggcaccattgatcgcctcaacaaagccaagctggcgggcggttcacctgaaactgac
gtgacctttaccaccgcgcatgtgggctatctgtacgccaactcaggcctgtttgaaaaa
ctcgatatgagcaaaatcccgaacgcagcaaacctggtgcaacaggcgaaagtcagccct
tatcacctcggcgtgtggggctacgtttacaccatcggctatcgcccggacctggtgccc
aaaggtgaaacctttaccagttggaacgatctgtggaagcccgagctgaaaggcacgctg
gcgctgccggactgggacccgagccatatcattgcggtggccgccaaactctccggcacc
gatgcggcgcactggcagcaaggccaggcgaagctgaaagcgctgatcccgaatatcaaa
tctttctataccgatgatgccaacagccagcaattaatctccactggcgaaaccccggta
caggtgatgctgtcgatgaacgcctacaacatgatggctgaaggggtggacgtcaaactg
gcgatccccaaagagggggcgattttgggcgtcgataccattggtatcaacaaaggcacc
aaacatagcgatcttgcatataagttcatgaatattgccctgaagcccgaaattcaggag
caagtggcaaagatttatcacggcagcccaacggtaaccaacgcgcatatcgatcctgaa
ctggcgaaactgccgggcatgctcaccacgcctgcgcagtggaatgccaccatcaatacc
gatccgcagttgcgtgccgagaaaaccgcagagtggcgtcagtggttctctgaaaacatc
atgtctcattga
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