KEGG   Kosakonia radicincitans: A3780_13285
Entry
A3780_13285       CDS       T04579                                 
Name
(GenBank) ClpV1 family T6SS ATPase
  KO
K11907  type VI secretion system protein VasG
Organism
krd  Kosakonia radicincitans
Pathway
krd03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:krd00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    A3780_13285
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:krd02044]
    A3780_13285
Secretion system [BR:krd02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   A3780_13285
SSDB
Motif
Pfam: AAA_2 AAA_lid_9 AAA ClpB_D2-small AAA_5 AAA_16 AAA_22 nSTAND3 Sigma54_activat AAA_7 AAA_25 AAA_14 ATPase_2 Zeta_toxin Clp_N NACHT AAA_18 DUF815 GlutR_dimer T2SSE Hpr_kinase_C SRP54 betaPIX_CC NBD_SMAX1 AAA_6 Fib_alpha AAA_33
Other DBs
NCBI-ProteinID: APG18486
LinkDB
Position
complement(2918515..2921127)
AA seq 870 aa
MSEISRAVLFGKLDTLLFTSLESATAFCKLRGNPYVELVHWLHQLMQQSEGDLQQVIRHF
SLNEEALTRDIVAALDKLPRGASSVSDLSEHIDTAVERAWVYGSLKFGVTRIRGGHLLAG
ILKTWSLATVLKGISSQFERVSADALLDNFEAIFANSKETQQTATAVGDTAAAPQQQGTL
AQYGQDLTARARDGKIDPVVGRDEEIRQMVDILMRRRQNNPLLTGEAGVGKTAVVEGLAL
RIAAGDVPEPLANVQLWLLDIGMLQAGAGMKGEFEARLQALINEVQSSPTPIILFIDEIH
TLIGAGGQQGTGDAANLLKPALARGQLRTIGATTWAEYKKYIEKDPALTRRFQTVQVAEP
DEEKAVLMLRSTVSALEKHHRVLLLDEAVVAAVKLSHRYIPARQLPDKAVALLDTACARV
AVSQSAPPPQLEDCLHRIAALEVEIEIANREAKMAAGDSGRVEKLTAARQQQEQLRNELT
QRWQQEQALVDAIIALRAQLHTAAEEELAALRDSLAQQQQALKTLQGDAPLLFTSVDANV
VAAVVSDWTGIPLGRMVKNEIDAVLKLADTLNERVIGQRHGLELIAKRVRTSRARLDDPN
KPVGVFMLCGPSGVGKTETALALAESLYGGEQNVITINMSEFQEAHTVSTLKGAPPGYVG
YGEGGVLTEAVRRRPYSVVLLDEIEKAHPDVHEIFFQVFDKGWMEDGEGRHIDFRNTIII
LTSNVGTELITGMCADPELMPEPDALRDALRPPLLQVFPPALLGRLLVVPYFPLSDEMLA
QIVRLQLKRIQRRLEENHGIVSEIDDSVVGQIVARCTEVESGGRMVDAILTNTLLPMMSQ
LLLDASARDEQYKRLRVTLEQGEFHCQFAA
NT seq 2613 nt   +upstreamnt  +downstreamnt
atgtcggaaattagccgcgccgtcctgttcggcaaactcgatacgctgttatttacctcg
ctggaaagcgccactgcgttttgcaaactgcgtggcaacccctacgtcgagctggttcac
tggctgcaccaactgatgcaacagtcagagggcgacctgcaacaggtgatccgccacttt
tcgctgaatgaagaggcgctgacgcgggatatcgtcgccgcgctcgataaactgccgcgc
ggtgcaagttcagtctccgatctctcggaacatatcgataccgccgttgagcgggcgtgg
gtttacggttcgctgaaatttggcgtcacgcgcattcgcggcggccatctgctggcgggg
atcctgaaaacctggagcctggcgaccgtgctgaaaggcatttcgtcacagtttgagcgg
gtgagtgccgatgcgctgctcgacaacttcgaggcgattttcgccaacagtaaagagacg
cagcagacggcaaccgccgttggcgataccgccgccgcgccgcaacagcagggcacgctg
gcgcaatacggacaggatctgacggccagagcgcgcgacggcaaaatcgatccggtggtg
ggccgcgacgaagagatccgccagatggtcgatattttgatgcgtcgccgccagaacaac
ccactgttaaccggcgaagccggggtcggaaaaacggcggtagtggaagggttagcgctg
cgcattgctgcaggcgatgtgccggaaccgctggcgaacgtgcaactgtggttgctggat
attggcatgttgcaggcgggcgcgggcatgaaaggcgagttcgaagcgcggctgcaagcg
ctgatcaacgaagtgcaatccagcccgacgccgatcattctgtttatcgacgaaattcac
accctgattggcgctggcggccagcagggcactggcgatgccgccaacctgctgaaaccg
gcgctggcgcgcggacagttgcgcaccatcggcgcgaccacctgggcggaatataagaaa
tacattgagaaagatccggcattaacccgtcgcttccagaccgtgcaggttgccgagccg
gatgaagagaaagcggtattaatgctgcgcagcacggtttccgcgctggagaaacaccat
cgcgtgttgctgcttgatgaagcggttgtcgccgccgtgaagctctctcaccgctacatt
ccggcgcgtcagttgccggataaagccgtggcgctgctcgatacggcctgcgcccgcgtc
gccgtcagccagagcgcgccgccgccgcagctggaggattgcctgcaccgcattgctgcg
ctggaggtggagattgagattgccaaccgcgaagcgaaaatggcggctggcgacagcggg
cgggtagagaaattaaccgccgcgcgtcaacagcaggaacaactgcgcaatgagctgacg
cagcgttggcagcaggagcaggcgctggttgatgccatcatcgcgctgcgcgcacagttg
cataccgcagcggaagaagagctggccgctttacgtgattcgctggcgcagcagcaacag
gcgcttaaaacattgcagggcgacgcgccgctgctgttcacttcggttgatgccaacgtg
gtagccgcggtggtctccgactggaccggcattccgctgggacggatggtgaaaaatgaa
atcgatgcggtgctgaaactggcggatacgctgaatgaacgcgtgatcggccagcgccac
ggtctggagttgatcgccaaacgcgtgcgcacctcgcgcgcccgcctcgacgatccgaac
aaaccggtcggcgtgtttatgctctgcggtccttccggcgtaggcaaaaccgaaactgcg
ctggcgctggcggaatcgctgtatggcggcgagcagaacgttatcaccatcaatatgagc
gagttccaggaagcgcataccgtctcgacgctgaaaggcgcacctccgggctacgtcggt
tatggcgaaggcggcgtgttaaccgaagccgtgcgccgtcgcccttacagcgtggtactg
ctggatgagatcgaaaaagcgcatccggacgtgcatgaaatcttcttccaggtgtttgat
aaaggctggatggaagatggcgaaggccgccatatcgattttcgcaataccatcatcatt
ctgacctcgaatgttggcaccgagttgattaccggcatgtgcgccgatccggaactgatg
ccggaaccggacgcgctgcgtgatgcactgcgtccgccgctgctgcaggttttcccgccc
gcgttgcttgggcgattgctggtggtgccttatttcccgctcagcgacgagatgctggcg
cagattgtgcgtttgcagcttaagcgtattcagcgccgtctggaggagaaccacggtatt
gtctcggaaatcgatgacagcgtggtcgggcagattgtggcacgctgtaccgaagttgaa
tcaggcggccgtatggtggacgccatccttacgaacactctgctgccaatgatgagccag
ctattactcgacgccagtgcgcgggacgagcaatataagcgcttacgtgtcacgctcgag
cagggtgagtttcactgtcagtttgcggcgtaa

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