Kosakonia radicincitans: A3780_13800
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Entry
A3780_13800 CDS
T04579
Name
(GenBank) Holliday junction DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
krd
Kosakonia radicincitans
Pathway
krd03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
krd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
A3780_13800
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
krd03400
]
A3780_13800
Enzymes [BR:
krd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
A3780_13800
DNA repair and recombination proteins [BR:
krd03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
A3780_13800
RecFOR pathway proteins
A3780_13800
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
AAA_22
Mg_chelatase
AAA_3
Rad17
AAA_14
AAA_16
TIP49
nSTAND3
AAA_2
AAA_18
RNA_helicase
NTPase_1
AAA_17
AAA_24
AAA_28
Bac_DnaA
NB-ARC
ABC_tran
TsaE
NPHP3_N
AAA_33
Motif
Other DBs
NCBI-ProteinID:
APG18584
UniProt:
A0AAX2ERB1
LinkDB
All DBs
Position
complement(3027800..3028810)
Genome browser
AA seq
336 aa
AA seq
DB search
MIEADRLVAPASTDVEEVVDRAIRPKMLNEYIGQPQVRSQMEIFIQAAKLRGDALDHLLI
FGPPGLGKTTLANIVANELGVNLRTTSGPVLEKAGDLAAMLTNLEPHDVLFIDEIHRLSP
VVEEVLYPAMEDYQLDIMIGEGPAARSIKIDLPPFTLIGATTRAGSLTSPLRDRFGIVQR
LEFYQVADLQHIVGRSARYMGLEMSEEGALEVARRSRGTPRIANRLLRRVRDFAEVKHDG
DITAEIAAKALDMLNVDAEGFDYMDRKLLLAVIDKFFGGPVGLDNLAAAIGEERETIEDV
LEPYLIQQGFLQRTPRGRMATVRAWNHFGITPPEMP
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
atgattgaagcagaccgtctggtggcccctgccagtactgatgtggaagaggttgtggat
cgcgctattcgcccgaaaatgctcaatgagtatatcggccagccgcaggttcgttcgcag
atggagatttttatccaggcggcaaaactgcgcggcgacgcgctcgatcatctgctgatt
tttggtcctcccggccttggaaaaaccacgctggcgaatattgtcgccaacgaattgggc
gttaatttacgcaccacttccggcccggtgctggaaaaggcgggagatttggcggcgatg
ctcaccaacctcgaaccgcacgacgtactgttcatcgatgaaattcaccgtctttcgccg
gtggtggaagaagtgctctatccggcgatggaagattaccagctcgatattatgatcggt
gaaggtccggcggcgcgttccatcaagatcgatcttccaccatttacgctgattggcgcg
acaacgcgagcggggtcgctgacttcgccactgcgtgaccgttttggcattgtgcagcga
ctggagttttaccaggtggccgatttgcaacatattgtcggtcgcagtgcccgctatatg
gggctggagatgagcgaagagggcgcgctggaagtggcgcgtcgttctcgcggtacgccg
cgtatcgccaaccgcctgctgcggcgcgtgcgcgattttgccgaagtgaaacatgatggc
gacatcacggctgaaatcgcggcgaaagcgctggatatgctgaatgttgatgcggaaggg
ttcgactatatggatcgtaaacttctgctggcagtgattgataaattcttcggtggtccc
gtcgggctggataacctcgcggcggcaatcggcgaggagcgggaaaccattgaggatgtg
ctggaaccgtatttgattcagcaaggttttttacagaggactccgcgcggacgcatggcg
acggtgcgggcctggaaccacttcggcatcacgcccccggaaatgccataa
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