Kosakonia radicincitans: A3780_15735
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Entry
A3780_15735 CDS
T04579
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
krd
Kosakonia radicincitans
Brite
KEGG Orthology (KO) [BR:
krd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
krd03032
]
A3780_15735
03400 DNA repair and recombination proteins [BR:
krd03400
]
A3780_15735
Enzymes [BR:
krd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
A3780_15735
DNA replication proteins [BR:
krd03032
]
Prokaryotic type
DNA Topoisomerases
A3780_15735
DNA repair and recombination proteins [BR:
krd03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
A3780_15735
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Motif
Other DBs
NCBI-ProteinID:
APG18946
UniProt:
A0AAX2EVI3
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All DBs
Position
complement(3447674..3450310)
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AA seq
878 aa
AA seq
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MSDLAREITPVNIEEELKSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMNVLGNDWN
KAYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSIDGDSAAAM
RYTEIRLAKIAHELMADLEKETVDYVDNYDGTERIPDVMPTKIPNLLVNGSSGIAVGMAT
NIPPHNLTEVINGCLAYIDNEDISVEGLMEYIPGPDFPTAAIINGRRGIEEAYRTGRGKI
YIRARAEVETDAKNGRETIIVHEIPYQVNKARLIEKIAELVKDKRVEGISALRDESDKDG
MRIVIEVKRDAVGEVVLNNLYSQTQLQVSFGINMVALHHGQPKIMTLKEILAAFVRHRRE
VVTRRTIFELRKARDRAHILEALAVALANIDPIIELIRRAPTPAEAKAGLIAQPWDLGNV
SSMLERAGDDAARPEWLEPEFGIRDGKYYLTEQQAQAILDLRLQKLTGLEHEKLLDEYKE
LLEQIAELLHILGSAERLMEVIREELELIREQFGDERRTEITANTADINIEDLINQEDVV
VTLSHQGYVKYQPLTDYEAQRRGGKGKSAARIKEEDFIDRLLVANTHDTILCFSSRGRLY
WMKVYQLPEASRGARGRPIVNLLPLEQDERITAILPVREYEEGVNVFMATASGTVKKTAL
TEFSRPRSAGIIAVNLNEGDELIGVDLTSGNDEVMLFSAAGKVVRFKEGAVRAMGRTATG
VRGIKLAEKDSVVSLIVPRGEGAILTVTQNGYGKRTAETEYPTKSRGTQGVISIKVTERN
GSVVGAVQVDDCDQIMMITDAGTLVRTRVSEISVVGRNTQGVILIRTAEDENVVGLQRVA
EPVDDEELDSIDGSVAEGDDDIAPEVDTDDDTADDADE
NT seq
2637 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaccttgcgagagaaattacaccggttaacatcgaggaagagctgaaaagctcc
tatctggactatgcgatgtcggtcattgttggccgtgcgctgccggatgtccgagatggc
ctgaaaccggttcaccgtcgcgtactttacgccatgaacgtattgggcaatgactggaat
aaagcctacaaaaaatctgcccgtgtcgttggtgacgtaatcggtaagtaccatccccat
ggtgattccgcggtgtatgacaccattgtccgtatggcgcagccgttctcgctgcgttac
atgctggttgatggtcagggcaacttcggttccattgatggcgactccgcggcggcgatg
cgttatacggaaattcgcctggcgaagatcgcccatgaattgatggccgatctggaaaaa
gagacggttgactacgtcgataactacgacggcaccgaaagaatcccagatgtaatgccc
accaagatcccgaacctgctggtgaacggctcttccgggattgcggtcggtatggcaacc
aacattccgccacacaacctgacggaagtgatcaacggttgcctggcctatatcgacaat
gaagacatcagcgttgaagggctgatggagtacattccggggccggattttccgactgcc
gccatcattaacggtcgccgtgggattgaagaagcctaccgcaccggtcgtggcaagatc
tacattcgcgcccgcgcagaggtagaaaccgatgcgaaaaacggccgtgaaaccattatc
gtgcatgaaattccgtatcaggtgaacaaagcgcgcctgatcgagaagattgccgaactg
gtgaaagacaaacgcgttgaaggcatcagcgcgctgcgcgacgagtctgataaagacggt
atgcgcatcgtcatcgaagtgaaacgcgatgctgtgggcgaagtggtgctgaacaacctc
tactcccagacgcaattgcaggtctccttcggtatcaacatggtggcgttgcaccatggt
cagccgaagatcatgacgctgaaagagattctggccgcgttcgtgcgtcaccgccgtgaa
gtggtgacccgtcgtaccattttcgaactgcgtaaagcccgtgaccgagcgcatatcctt
gaagcgctggccgtggcgctggcgaatatcgatccgatcatcgaactgatccgtcgtgcg
ccgaccccggccgaagcgaaagcgggcctgatcgcgcagccgtgggatctgggcaatgtc
tcctcgatgctggaacgtgcgggcgatgacgcagcacgtccggagtggctggagccggag
ttcggtatccgtgacggtaagtactacctgaccgagcaacaggcacaggcgattctggat
ctgcgtttgcagaaactgactggccttgagcatgaaaaactgctcgatgaatacaaagag
ctgctggagcagatcgctgaactgctgcacatcctcggcagcgctgagcgcctgatggaa
gtgattcgcgaagagctcgaactgattcgcgaacagttcggtgatgagcgccgtaccgaa
attaccgcgaacaccgccgatatcaatatcgaagacctgatcaatcaggaagacgttgtg
gttacgctgtcgcatcagggctacgtgaagtatcagccgctgaccgactacgaagcccag
cgccgtggtggtaaaggtaaatcggctgcgcgtattaaagaagaagactttattgaccgc
ctgctggtggccaacacccacgatacgatcctctgcttctccagccgtggccgtctctac
tggatgaaggtttaccagctgccggaagcgagccgtggcgcgcgtggtcgtccgatcgtc
aacctgttgccgctggagcaggacgaacgtatcacggcgatcctgccggtacgcgaatac
gaagagggcgttaacgtctttatggcgaccgccagcggtaccgtgaagaaaactgcgctt
accgaattcagccgtccgcgttctgccgggatcattgccgttaacctgaacgaaggcgac
gaactgattggcgtcgatctgacttccgggaacgacgaagtgatgttgttctctgctgcc
ggtaaagtggtgcgctttaaagagggggcggtgcgcgcgatgggtcgtacggcgaccggt
gtacgcggcatcaagctggcggaaaaagacagcgtggtatcgctgattgttccgcgcggc
gaaggcgccatcctgacggtcacgcagaacggttacggtaaacgtactgctgaaaccgag
tacccgaccaaatctcgtggtacacagggcgttatctccatcaaggtcaccgaacgtaat
ggctccgtggtcggcgcggtgcaggtcgatgattgcgaccagatcatgatgatcactgat
gccggtacgctggtgcgtacacgcgtgtcggaaatcagcgtggtgggccgtaacacccag
ggtgtgatcctcatccgtaccgcggaagatgaaaacgttgtgggtctgcaacgcgtcgcc
gaaccggtggatgacgaagagctggactccatcgatggcagtgtggcggaaggcgatgac
gacatcgcgccggaagttgacactgacgacgatacggcggatgacgccgacgagtaa
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