Kosakonia radicincitans: A3780_17410
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Entry
A3780_17410 CDS
T04579
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
krd
Kosakonia radicincitans
Pathway
krd03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
krd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
A3780_17410
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
krd03400
]
A3780_17410
Enzymes [BR:
krd01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
A3780_17410
DNA repair and recombination proteins [BR:
krd03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
A3780_17410
Prokaryotic type
A3780_17410
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
APG19255
LinkDB
All DBs
Position
3812222..3812911
Genome browser
AA seq
229 aa
AA seq
DB search
MTTSLTWHDVLAEEKQQPYFINTLSTVAAERQSGMTIYPPQKDVFNAFRFTELGNVKVVI
LGQDPYHGPGQAHGLAFSVRPGIAIPPSLLNMYKELENTIPGFVRPQHGYLESWARQGVL
LLNTVLTVRAGQAHSHASLGWETFTDKVIALINEHREGVVFLLWGSHAQKKGAIIDKSRH
HVLRAPHPSPLSAHRGFFGCNHFALANQWLERHGEQPIDWMPTLPAETE
NT seq
690 nt
NT seq
+upstream
nt +downstream
nt
atgaccacctcattaacatggcatgatgtgctggcagaagaaaaacagcagccctacttt
attaacactctcagtacggttgcggctgagcggcagtccggaatgaccatctacccaccg
cagaaagatgtgtttaacgctttccgttttaccgaactgggcaacgttaaagtggtgatt
ctggggcaggatccctatcacggtcctggtcaggcacacggcctggcattttctgtgcgc
cccggtatcgccatcccaccttccctgctgaatatgtataaagagctggaaaacaccata
ccgggcttcgtgcggccgcagcatggttatctggagagctgggcgcgccagggcgtattg
ctgctcaacaccgtgctgacggtacgcgccggccaggcgcattcgcatgccagtctcggc
tgggaaacctttaccgacaaagtgatcgcactgattaatgaacatcgggaaggcgtcgtg
tttttactctggggttcgcatgcgcagaagaaaggggcgattatcgacaaatcccgccac
catgttttgcgcgcaccgcacccatcgccgctctctgcgcatcgcggtttctttggctgt
aatcactttgcgctggcaaatcagtggctggagcggcatggagagcagccgatcgactgg
atgccgactctgcccgcggaaaccgaataa
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