KEGG   Kosakonia radicincitans: A3780_18105
Entry
A3780_18105       CDS       T04579                                 
Symbol
fliA
Name
(GenBank) RNA polymerase sigma factor FliA
  KO
K02405  RNA polymerase sigma factor FliA
Organism
krd  Kosakonia radicincitans
Pathway
krd02020  Two-component system
krd02040  Flagellar assembly
Brite
KEGG Orthology (KO) [BR:krd00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    A3780_18105 (fliA)
 09140 Cellular Processes
  09142 Cell motility
   02040 Flagellar assembly
    A3780_18105 (fliA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:krd03021]
    A3780_18105 (fliA)
  09183 Protein families: signaling and cellular processes
   02035 Bacterial motility proteins [BR:krd02035]
    A3780_18105 (fliA)
Transcription machinery [BR:krd03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     A3780_18105 (fliA)
Bacterial motility proteins [BR:krd02035]
 Flagellar system
  Flagellar assembly proteins
   Stator
    A3780_18105 (fliA)
SSDB
Motif
Pfam: Sigma70_r4 Sigma70_r2 Sigma70_r4_2 Sigma70_r3 UPF0122 HTH_37 Peptidase_C26 CdaS_N
Other DBs
NCBI-ProteinID: APG19377
LinkDB
Position
complement(3956827..3957555)
AA seq 242 aa
MNGIYRSDGTIQKEQLWPKYGYLVRYEALKLQSKLSSSVDIDDLIQAGAIALLDAVEQFD
PTKGVKMSVYIAQRLRWAFMDELREHDWVPRRVRRKSREVSAAIMRVEQSTGGVASEADV
AAEMGMSLQEYQQTLADTNTSMLCSLDELQELLADGLELEEMEQDHLDPLHDALLGDLTK
QVSNEIKALPEREQMLLNLYYQQDLNMKEVGVLLGITETRVSQLHSQTIKRLRARLEDRG
WE
NT seq 729 nt   +upstreamnt  +downstreamnt
gtgaatgggatttatcgctctgacggcacaattcagaaagaacaactatggcctaaatat
ggttatttagtccgctacgaagcactgaaattacaatccaaattatcatcaagcgttgat
attgacgatttaattcaggcaggcgccattgcgcttctggatgcagtagaacagtttgat
ccgactaaaggggtcaagatgagcgtttatattgcacaacgccttcgctgggcatttatg
gatgaattacgcgaacatgactgggttcctcgccgcgttcgccgtaaatcccgcgaagtc
tctgccgcgattatgcgggtggaacagagcaccggcggtgttgcttcggaagcggatgtt
gcagcggaaatgggaatgtcgctgcaggagtatcagcagacgctggcagatacgaatacc
agcatgctctgctcgctggatgagctccaggagctgctggcagatggtcttgaactggaa
gagatggaacaggatcacttagacccgttgcatgatgcgctgttaggcgatctgacaaag
caagtcagcaatgagatcaaagcgttgccggaaagagagcagatgctgctgaatctttat
tatcaacaagatttgaatatgaaagaggttggcgtgctgctgggcattacggaaacacgc
gtgagccagctgcatagccaaacaattaaacgattacgggcccgcctggaagatcgtggg
tgggaataa

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