Kosakonia radicincitans: A3780_19280
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Entry
A3780_19280 CDS
T04579
Symbol
truD
Name
(GenBank) tRNA pseudouridine(13) synthase TruD
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
krd
Kosakonia radicincitans
Brite
KEGG Orthology (KO) [BR:
krd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
krd03016
]
A3780_19280 (truD)
Enzymes [BR:
krd01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
A3780_19280 (truD)
Transfer RNA biogenesis [BR:
krd03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
A3780_19280 (truD)
Prokaryotic type
A3780_19280 (truD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
APG19598
LinkDB
All DBs
Position
complement(4193163..4194212)
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AA seq
349 aa
AA seq
DB search
MTEFENLTWLHGKPAGSGILKANPEDFVVVEDLGFEPDGEGEHILVRILKSGCNTRFVAD
ALAKFLKIHAREVSFAGQKDKHAVTEQWLCARVPGNTMPDLSTFELEGCKVLEYARHKRK
LRLGALQGNAFTLVLREVSDRADVEARLQTISEKGVPNYFGAQRFGIGGSNLQGALRWAQ
SAAPVRDRNKRSFWLSAARSALFNQIVNERLKKTDFNQVVDGDALQLAGRGSWFVASEEE
RAELQARVDAKTLMITAALPGSGDWGAQRAALAFEQQAVADAPELQALLVREKVEAARRA
MLLYPQKLCWNWWDDVTVELRFWLPAGSFATSVIRELINTSGDYANIAE
NT seq
1050 nt
NT seq
+upstream
nt +downstream
nt
atgacagaattcgaaaacctgacctggctgcatggcaaaccagcaggtagcgggatcctc
aaagccaacccggaagatttcgtcgttgtggaagatctcggctttgaaccggatggcgaa
ggcgaacatattctggtgcgtattctgaaaagtggctgcaacacccgttttgtggcagat
gcgctggcaaaattcctaaaaattcatgcacgcgaagtgagcttcgccgggcaaaaagat
aaacatgcggtgaccgagcaatggctctgcgcccgcgtgcctggcaatacgatgccggat
ctcagcacgtttgagcttgaaggctgtaaagtgctggagtatgcccgccataagcgcaag
ctgcggctgggtgcattgcagggcaacgcatttacgctggtgctgcgtgaagtgagcgat
cgggcggatgtggaagcccgtttgcagaccatcagtgaaaaaggtgtgccgaattatttc
ggtgcgcagcgttttggtattggcggcagcaatttgcagggcgcgttgcgctgggcgcaa
agcgctgcgccggttcgcgatcgtaataaacgcagcttctggctgtcggcggcgcgcagc
gcgttgtttaatcaaatcgtcaacgaacgattgaaaaaaacagactttaatcaagttgtt
gacggcgatgcgctacaattagcggggcgcggtagctggtttgtcgccagcgaggaagag
cgcgcggaattgcaggcgcgcgtcgatgcgaaaaccttaatgattaccgccgcgctgccg
ggtagcggcgattggggcgcgcagcgcgcagcgctggcgtttgagcaacaggcggttgcc
gatgcgccggagttacaggcgttgctggtgcgggaaaaagtagaagctgcgcgccgcgca
atgctgctctatccgcagaagctttgctggaactggtgggatgatgtcaccgtcgagtta
cgtttctggctcccggcgggaagttttgccaccagcgtgatcagggaacttattaacaca
tcgggtgattatgcgaatattgctgagtaa
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