Kosakonia radicincitans: A3780_19345
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Entry
A3780_19345 CDS
T04579
Name
(GenBank) transcriptional regulator
KO
K03566
LysR family transcriptional regulator, glycine cleavage system transcriptional activator
Organism
krd
Kosakonia radicincitans
Brite
KEGG Orthology (KO) [BR:
krd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
krd03000
]
A3780_19345
Transcription factors [BR:
krd03000
]
Prokaryotic type
Helix-turn-helix
LysR family
A3780_19345
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
HTH_30
Motif
Other DBs
NCBI-ProteinID:
APG19610
LinkDB
All DBs
Position
complement(4204480..4205394)
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AA seq
304 aa
AA seq
DB search
MSKRLPPLNALRVFDAAARHLSFTRAADELFVTQAAVSHQIKSLEDFLGLKLFRRRNRSL
LLTEEGQSYFQDIKEIFSQLTEATRKLQARSAKGALTVSLLPSFAIQWMVPRLSDFNSTY
PGIDVRIQAVDRQEDKLADDVDVAIFYGRGNWPGMRVEKLYAEYLLPVCSPLLLTGDKAL
KTPEDLAHHTLLHDASRRDWQTYTRQLGLNLNVQQGPIFSHSSMVLQAAIHGQGIALANN
VMAQSEIEAGRLVCPFNDVLVSKNAFYLVCHDSQAELGKIAAFRQWILAKAASEQEKFRF
RYEH
NT seq
915 nt
NT seq
+upstream
nt +downstream
nt
atgtccaagcgattaccaccactgaatgcattacgcgtttttgatgctgccgcacgccat
ttaagtttcacgcgcgcagctgatgagctttttgtgacgcaggccgcagtaagccaccaa
atcaagtctcttgaggatttcctcgggctcaaactctttcgccgacgcaaccgttcactg
ctgctgaccgaagaggggcagagctattttcaggatattaaagaaatattttcccaactg
acggaagccacacgtaagttgcaggcgcgcagtgcaaaaggcgcgctaaccgtcagtttg
ctccccagttttgccatccagtggatggtgccaaggctctccgactttaactcaacttat
ccgggaattgacgttcgtatccaggccgttgaccgtcaggaagataaactggcggacgat
gtcgacgtggcgattttttacgggcgcggtaactggccgggaatgcgcgtcgaaaaattg
tacgccgaatatttgctgccggtctgttcgccgctgttgctgacgggcgataaagcgctg
aaaacgccggaagatttagcgcaccacactttattgcacgacgcatcgcgtcgcgactgg
caaacttatacgcggcaattaggtcttaacctcaacgttcagcagggacccatcttcagc
cacagctctatggtgcttcaggcggccatccacggacaggggatcgcactggccaacaat
gtaatggcacagtccgaaatcgaggcaggtcgcctggtctgcccgtttaatgatgttctg
gtcagtaagaatgcgttttatctggtttgtcatgacagtcaggcagaactgggtaaaata
gccgcctttcgtcagtggatcctggccaaagcggcaagcgaacaggaaaaattccgtttc
cgttatgaacattaa
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integrated database retrieval system
