Kosakonia radicincitans: A3780_20245
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Entry
A3780_20245 CDS
T04579
Name
(GenBank) ornithine decarboxylase
KO
K01581
ornithine decarboxylase [EC:
4.1.1.17
]
Organism
krd
Kosakonia radicincitans
Pathway
krd00330
Arginine and proline metabolism
krd00480
Glutathione metabolism
krd01100
Metabolic pathways
krd01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
krd00001
]
09100 Metabolism
09105 Amino acid metabolism
00330 Arginine and proline metabolism
A3780_20245
09106 Metabolism of other amino acids
00480 Glutathione metabolism
A3780_20245
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
A3780_20245
Enzymes [BR:
krd01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.17 ornithine decarboxylase
A3780_20245
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
OKR_DC_1
OKR_DC_1_C
OKR_DC_1_N
Beta_elim_lyase
Motif
Other DBs
NCBI-ProteinID:
APG19777
LinkDB
All DBs
Position
complement(4402605..4404740)
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AA seq
711 aa
AA seq
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MKSMKIAVSCELVSLLSTHREVVTLESTDFTDVAAVVITVAESRSGILALLKRTGFNVPV
FLFSGEPVDMPEGITAVISGKDQEWLELEAAAVDYENNLLPPFFDTLRQYVEMDNSTFAC
PGHQHGEFFKKHPAGRQFYEFFGENVFRADMCNADVKLGDLLIHEGSAKHAQKFAAKVFN
ADKTYFVLNGTSAANKVVTNALLTRGDLVLFDRNNHKSNHHGALIQAGATPVYLEAARNP
FGFIGGIDEHCFDEKYLRDLIRDVAPHKADHPRPFRLAVIQLGTYDGTIYNARQVIDKIG
SLCDYILFDSAWVGYEQFIPMMADCSPLLLDLNENDPGIFVTQSVHKQQAGFSQTSQIHK
KDNHLRGQARFCPHKRLNNAFMLHASTSPFYPLFAALDVNAKIHQGESGRRLWAECVALG
IEARKAIIANCKMIKPFVPPEIAGRPWQDHPTEVIARERRFFSFEPGDKWHGFEGYAREQ
YFVDPCKLLLTTPGIDAETGEYADFGIPATILAHFLRENGIVPEKCDLNSILFLLTPAES
AEKMAQLVAMLGQFEQHIEDDTPLADVLPTIFNKYPVRYRDYTLRELCQEMHDLYVSFDV
KDLQKAMFRKESLPAVVMNPQDANSEFIRGNVELVRISEAEGRIAAEGALPYPPGVLCVV
PGEVWGGAVQRYFLALEEGVNLLPGFSPELQGVYSETDADGIKRLYGYVLK
NT seq
2136 nt
NT seq
+upstream
nt +downstream
nt
atgaaatcgatgaaaattgccgtcagctgcgagctggtatccctgctttccacccaccga
gaagtggtgacgctggagagtaccgactttacggatgtggcggcagtcgtcataacagtt
gcggagagtcgtagcggcattctggcgctgctcaaacggacaggctttaacgtgccggta
ttcttgttctccggtgagccggtcgatatgccggaaggcattacggcggttatctctggt
aaagatcaggagtggctggagctggaagctgccgccgtcgattatgaaaacaatttactg
ccgccgtttttcgatacgctgcgccagtatgtcgagatggacaacagcacctttgcctgt
ccgggtcatcagcacggtgaatttttcaaaaagcatccggcaggacgccagttctatgaa
ttcttcggcgagaacgtctttcgcgccgacatgtgtaacgccgacgtcaaactgggcgat
ctgttgatccatgaaggatcggcgaagcatgcgcagaaattcgcggcgaaagtgtttaac
gctgacaaaacctatttcgtcctcaacggtacatccgccgctaataaggtggtgaccaac
gcgctgctgactcgcggcgatctggtgctgttcgaccgcaataaccataaatccaatcat
cacggcgcgctgatccaggccggagcaacgccggtttacctggaagcggcacgtaacccg
tttggttttatcggcggcatcgacgagcactgtttcgatgagaaatacctgcgcgatctg
atccgcgatgtcgcaccgcataaggctgatcatccacgtccgtttcgcctggcagtgatc
cagctagggacttacgatggcactatctacaacgcccgtcaggtgatcgacaagattggc
agcctgtgtgattacattctgtttgactcggcgtgggttggttacgagcagtttatcccg
atgatggcggactgctcgccgctgctgctggatctgaacgaaaacgatccgggtattttt
gtcacgcagtcggtgcacaaacagcaggccggtttctcgcaaacctcgcagatccacaag
aaggataaccatctgcgcggtcaggcgcgattctgcccgcataagcggctgaataacgcc
tttatgctgcatgcctcgacaagcccgttctatccgctgttcgctgcactggatgtgaac
gccaaaatccatcagggcgagagcgggcgccgcctgtgggccgagtgtgtggcgctgggg
atcgaagcgcgcaaggcgatcattgccaactgcaaaatgatcaaacctttcgtgccgcca
gagatcgctggccgcccgtggcaggatcatcccaccgaggtgattgcccgcgaacgccgc
ttcttcagctttgagccgggtgacaaatggcacggctttgagggctatgcgcgcgaacag
tactttgttgatccctgcaagctgctgctgaccacgcccggtatcgatgcggaaaccggg
gaatacgccgattttgggatcccggcgaccattctggcgcacttcctgcgcgagaacggc
attgtaccggagaagtgcgatctcaactcgatcctgttcctgctgacgccagccgagagc
gcagagaagatggcgcagttggtggcgatgctcggtcagtttgaacagcatattgaggat
gacacgccgctcgccgatgtgttgccgactatatttaacaaatacccggtgcgctaccgc
gattacaccctgcgtgagctgtgccaggagatgcacgatctgtatgtcagctttgatgtg
aaggatctgcaaaaagcgatgttccgcaaagagagcctgccagcggtggtgatgaatcct
caggacgccaacagcgagtttattcgcggtaacgttgaactggtgcgtatcagtgaggca
gaagggcgcatcgccgctgaaggcgcgctgccttacccgccgggcgtgctgtgcgtggta
ccgggtgaagtgtggggcggggccgtccagcgctacttcctggcgctggaagaaggcgtc
aatctgctaccgggcttttctccggagttgcagggcgtctattccgaaaccgatgccgac
gggatcaaacgcctgtacggctatgtgctgaagtaa
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