Kosakonia radicincitans: A3780_21980
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Entry
A3780_21980 CDS
T04579
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
krd
Kosakonia radicincitans
Brite
KEGG Orthology (KO) [BR:
krd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
krd03016
]
A3780_21980 (truB)
Enzymes [BR:
krd01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
A3780_21980 (truB)
Transfer RNA biogenesis [BR:
krd03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
A3780_21980 (truB)
Prokaryotic type
A3780_21980 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB-C_2
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
APG20101
LinkDB
All DBs
Position
complement(4754002..4754949)
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AA seq
315 aa
AA seq
DB search
MSRPRRRGRDVHGVLLLDKQQGASSNDVLQKVKRLYNANRAGHTGALDPLATGMLPICLG
EATKFSQYLLDSDKRYRVIARLGQRTDTSDADGQIVEERPVIFTDEQLAAALESFRGDTQ
QVPSMYSALKYQGKKLYEYARQGIEVPREARPITVYELLFIRHEGNELELEIHCSKGTYI
RTIIDDLGEKLGCGAHVIYLRRLAVSKYPVERMVTLEHLHELVAQAEQQNIPAAQLLDPL
LMPMDSPASDFPVVNIPSVVAAYFKNGQPVRASAAPKEGLVRVTEGDEGKFIGMGEMDDD
GRVAPRRLVVEYPAV
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atgagtcgtcctcgtcgtcgtggtcgcgacgtgcatggcgtgctgctgcttgataaacag
cagggcgcgtcgagcaatgatgtgctgcaaaaggtcaaacgcctctacaatgctaaccgt
gccgggcataccggggcgctggatccgctggcgaccggtatgttgccgatttgtctgggc
gaagcgacaaagttttcccagtatctgctggattctgataaacgctatcgggtcattgcg
cggctgggccagcgaactgatacttctgatgcggacgggcaaattgtcgaagagcgtccg
gtaatctttaccgacgagcaattggctgcggcgctggagagtttccgtggtgatacgcag
caagtgccgtcaatgtattccgcgctgaaatatcagggaaagaaactctacgagtatgca
cggcagggtattgaagtgccgcgtgaagcccggcctataaccgtttatgagctgctattt
attcgtcatgaaggtaatgagctggagctggaaatccactgctctaaagggacttacatc
cgcaccattattgacgatctgggtgagaagctgggttgtggcgcgcatgttatctatctg
cgtcgtctggcggtgagcaaatacccggttgagcggatggtcaccctggagcacctgcac
gagctggttgcccaggctgagcagcagaatattccggcggcgcagctactggatccgctg
ttgatgccgatggacagcccggcatccgattttcctgtcgtcaatattccttctgtcgtg
gccgcgtatttcaaaaacggtcagccggtacgtgcatcagccgcgcccaaagagggcctg
gtacgcgtgacggaaggtgatgaaggtaaatttatcggtatgggtgagatggatgatgat
ggccgtgtggcgccgcgtcgtctggttgtagagtatcctgctgtataa
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