Kosakonia radicincitans: A3780_22155
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Entry
A3780_22155 CDS
T04579
Name
(GenBank) RNA polymerase factor sigma-54
KO
K03092
RNA polymerase sigma-54 factor
Organism
krd
Kosakonia radicincitans
Pathway
krd02020
Two-component system
krd02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
krd00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
A3780_22155
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
A3780_22155
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
krd03021
]
A3780_22155
Transcription machinery [BR:
krd03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
A3780_22155
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
Motif
Other DBs
NCBI-ProteinID:
APG20133
UniProt:
A0AAX2EU92
LinkDB
All DBs
Position
4784846..4786279
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AA seq
477 aa
AA seq
DB search
MKQGLQLRLSQQLAMTPQLQQAIRLLQLSTLELQQELQQALESNPLLEQADLHEEVDSQQ
TQENEGLDTVDALEQKEMPEELPLDASWDEIYTAGTPSGSSHDYIDDELPIYQGETTQSL
QDYLMWQVELTPFSDTDRAIATSIVDAVDETGYLTVSLEDVLESMGDEEIGLDEVEAVLK
RVQRFDPVGVAARDLRDCLLIQLSQFAKDTPWCEEARLIISDHLDLLANHDFRSLMRVTR
LKEDVLKEAVNLIQSLDPRPGQSIQTGEPEYVIPDVLVRKHNGRWTVELNSDSIPRLQIN
QHYASMGGGARNDADTQFIRSNLQEAKWLIKSLESRNDTLLRVSRCIVEQQQAFFEQGEE
FMKPMVLADIAQAVEMHESTISRVTTQKYLHSPRGIFELKYFFSSHVNTEGGGEASSTAI
RALVKKLIAAENPAKPLSDSKLTTLLSDQGIMVARRTVAKYRESLSIPPSNQRKQLV
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
atgaagcaaggtttgcaattaaggcttagccaacagctagctatgacgccgcaactgcaa
caggctatccgtctgttgcagctgtctacgttagaacttcagcaggaacttcagcaagcg
ctggagagtaacccattgctggaacaagccgatcttcatgaagaagtggatagccaacaa
acccaggaaaatgaaggcctggatactgtagacgcgctcgaacagaaagagatgcctgaa
gagctgccgctggacgccagctgggatgagatttataccgccggaacgccttccggcagc
agccacgattatattgatgacgaactgccgatttatcagggtgaaacgacacagtctctt
caggattacctgatgtggcaggtagagttaacgccgttttccgataccgatcgcgcaatc
gcaacctctattgtcgatgctgtcgatgagaccggctaccttaccgtgtcgcttgaggat
gtgctggaaagcatgggcgatgaagaaatcggtctcgatgaagttgaagcggtgttaaag
cgcgttcagcgtttcgatccggttggcgtcgctgcgcgcgatctgcgcgactgcctgttg
atccaactgtcccaattcgcgaaagatacgccctggtgtgaagaggctcgcctgattatc
agcgatcaccttgatctgctcgctaaccatgatttccgctctctcatgcgcgtcacacgt
cttaaagaggatgtgctgaaagaagcggtaaatctgatccagtcgctggatccgcgcccc
ggccagtcgatccagaccggtgaaccagaatatgtcatcccggatgtgctggtgcgtaag
cacaacgggcgctggacggtagaactgaactccgatagcattccgcgtctgcaaatcaac
cagcactacgcttcaatgggcggtggcgcgcgcaatgacgccgacacccagtttatccgc
agtaacttgcaggaagcgaagtggctgatcaaaagccttgaaagccgtaatgacacgcta
ttgcgcgtcagccgctgcatcgtcgagcagcagcaggcattctttgaacagggcgaagag
tttatgaaaccgatggtgctggcggatatcgctcaggccgtcgaaatgcacgagtccacg
atttcccgtgtgacaacgcagaagtacctgcacagtcctcgcggcatttttgaactgaag
tatttcttctccagccatgtgaatacggaaggcggcggcgaagcctcgtcaacagccatt
cgcgcactggttaagaaattaatcgccgcagaaaaccctgcaaaaccactgagcgacagt
aagctgacgacgctactttccgatcaaggaattatggtagcgcggcgtaccgttgcgaag
tatcgagagtctttatccattccgccgtctaaccagcgtaaacagctggtgtga
DBGET
integrated database retrieval system