Kosakonia radicincitans: A3780_22280
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Entry
A3780_22280 CDS
T04579
Symbol
gabD
Name
(GenBank) succinate-semialdehyde dehydrogenase (NADP(+))
KO
K00135
succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:
1.2.1.16
1.2.1.79
1.2.1.20
]
Organism
krd
Kosakonia radicincitans
Pathway
krd00250
Alanine, aspartate and glutamate metabolism
krd00310
Lysine degradation
krd00350
Tyrosine metabolism
krd00650
Butanoate metabolism
krd00760
Nicotinate and nicotinamide metabolism
krd01100
Metabolic pathways
krd01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
krd00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
A3780_22280 (gabD)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
A3780_22280 (gabD)
00310 Lysine degradation
A3780_22280 (gabD)
00350 Tyrosine metabolism
A3780_22280 (gabD)
09108 Metabolism of cofactors and vitamins
00760 Nicotinate and nicotinamide metabolism
A3780_22280 (gabD)
Enzymes [BR:
krd01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.1 With NAD+ or NADP+ as acceptor
1.2.1.16 succinate-semialdehyde dehydrogenase [NAD(P)+]
A3780_22280 (gabD)
1.2.1.20 glutarate-semialdehyde dehydrogenase
A3780_22280 (gabD)
1.2.1.79 succinate-semialdehyde dehydrogenase (NADP+)
A3780_22280 (gabD)
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Motif
Pfam:
Aldedh
Motif
Other DBs
NCBI-ProteinID:
APG20157
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Position
complement(4810191..4811645)
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AA seq
484 aa
AA seq
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MTTQVLQDNPLFQTGYLVDGVWKSLNTTFDVLNPATGEVIASVAKAGKKETEDAIAAASR
AFPGWRAKTAKERSAILYRWYELIIENKSWLGRLMTTEQGKPLKEAEGEVEYAASFIQWF
AEQAKRANGEIIPPIKPGSRILATREPVGVVAAITPWNFPMAMLTRKLGPALAAGCTGVI
KPANNTPLSAFALLALAKKAGVPDGVLNAVAGNTAEISDAIMASHEVRKISFTGSTAVGK
TLVRNAAETMKKVSMELGGNAPYIVFEDADIDAAVQGAIANKFRNAGQVCVSVNRFYIHE
SVYDTFTQKLSTAVNALKVGNGLEEGVVVGPLIEPAAVEKVREHVEDAVAKGAKVLAGGK
AHSLGGNFWQPTVLGDCSDGMKLAQEETFGPVAACFRFTSEEEVVQRANATPFGLAAYFY
TQNLQRVFRVSQAIESGMIGINECAVSTELGPFGGVKESGLGREGSVLGLEEFLEVKTLH
LGGL
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atgacaacgcaggtattgcaggacaacccactttttcagaccggctatctggtggatggc
gtctggaaatccctgaacaccacatttgacgttctgaatccggccaccggtgaagtcatc
gccagcgtcgcgaaagcagggaaaaaagagaccgaagatgccattgctgcggcgagtcgg
gcttttccgggctggcgggcgaaaaccgcgaaagagcgttccgccatcctctatcgttgg
tatgaattgatcattgaaaataaaagctggttagggcgcttaatgaccaccgagcagggg
aaaccattgaaagaagctgagggggaagtcgagtatgccgccagctttattcagtggttt
gccgaacaggcaaaacgcgccaacggtgaaattatcccgccgatcaagccggggtcgcgc
attctggcgacccgggaaccggtaggcgtggtggctgccatcacgccgtggaacttcccg
atggcaatgctgacccgtaaactggggcctgcgttggcggcagggtgtaccggcgttatc
aaaccggcgaacaataccccgctcagcgcatttgccttgttggcgctggcgaagaaggcc
ggcgtaccggatggtgtgctcaatgctgttgccggtaacacggcagaaatcagcgatgcg
attatggccagccacgaggtacgtaagatctctttcaccggttcgactgcggtagggaaa
accctggttcgcaatgccgccgaaaccatgaaaaaagtgtcgatggaactggggggcaac
gcgccgtatatcgtctttgaagatgccgacatcgatgcagcagtgcagggggcgattgct
aacaagttccgcaatgccggccaggtatgcgttagcgtaaaccgcttctatattcatgag
tctgtctacgatactttcacgcaaaagctgagtacggcggtaaacgcattgaaagtggga
aatggtctggaagagggcgtggtagtggggccgttgattgagccggccgccgtcgagaaa
gtgcgtgagcatgtggaagatgcggtggccaaaggcgctaaagtgctggctggtggtaaa
gcgcacagccttggcggtaacttctggcaaccaaccgtactgggcgattgtagcgatggc
atgaagctggcgcaggaagagacatttggtccggttgctgcctgtttccgctttaccagc
gaggaagaagtcgtccagcgtgcgaatgcgacgccgtttggcctggctgcttacttctat
acgcaaaacttgcagcgggtgttccgcgtttcgcaggccattgagagtggaatgatcggt
attaacgagtgcgcagtatccaccgaactggggccgttcggcggagtgaaagagtcgggt
ctcggtcgcgaagggtcggtgctggggctggaggagtttcttgaggtgaaaaccctgcat
ctcggcggattataa
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