Kosakonia radicincitans: A3780_24125
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Entry
A3780_24125 CDS
T04579
Symbol
rfaD
Name
(GenBank) ADP-glyceromanno-heptose 6-epimerase
KO
K03274
ADP-L-glycero-D-manno-heptose 6-epimerase [EC:
5.1.3.20
]
Organism
krd
Kosakonia radicincitans
Pathway
krd00541
Biosynthesis of various nucleotide sugars
krd01100
Metabolic pathways
krd01250
Biosynthesis of nucleotide sugars
Module
krd_M00064
ADP-L-glycero-D-manno-heptose biosynthesis, sedoheptulose-7P => ADP-LDmanHep
Brite
KEGG Orthology (KO) [BR:
krd00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
A3780_24125 (rfaD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
krd01005
]
A3780_24125 (rfaD)
Enzymes [BR:
krd01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.20 ADP-glyceromanno-heptose 6-epimerase
A3780_24125 (rfaD)
Lipopolysaccharide biosynthesis proteins [BR:
krd01005
]
Core region
A3780_24125 (rfaD)
BRITE hierarchy
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GFIT
Motif
Pfam:
Epimerase
GDP_Man_Dehyd
3Beta_HSD
RmlD_sub_bind
NAD_binding_4
Polysacc_synt_2
KR
adh_short
Ldh_1_N
Motif
Other DBs
NCBI-ProteinID:
APG20502
UniProt:
A0AAX2EXY2
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All DBs
Position
5200789..5201721
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AA seq
310 aa
AA seq
DB search
MIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKFVNLVDLHIADYMDKEDFLIQI
MAGEEFGDIDAVFHEGACSSTTEWDGKYMMDNNYQYSKELLHYCLEREIPFLYASSAATY
GGRTSDFIESREYEKPLNVYGYSKMLFDEYVRSILPEANSPVVGFRYFNVYGPREGHKGS
MASVAFHLNTQLNNGESPKLFEGSDNFKRDFVYVGDVAAVNLWFWENGVSGIYNLGTGRA
ESFQAVADATLAYHKKGSIEYIPFPEKLKGRYQAFTQADLTNLRKAGYDKPFKTVAEGVT
EYMAWLNRDA
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
atgatcatcgttaccggcggcgcgggttttatcggcagtaacattgttaaagccctgaat
gataaaggcatcactgatattctggtggtggacaacctgaaagacggtaccaagtttgtc
aatctggttgacctgcacatcgccgactacatggataaagaagacttcctgatccagatt
atggccggggaagagttcggcgacattgacgcggtattccacgaaggtgcgtgctcctcc
acgacagagtgggacggcaagtacatgatggataacaactatcagtactctaaagagctg
ctgcattactgcctggaacgtgaaatccccttcctgtatgcctcttccgcagccacgtac
ggcggtcgaacttccgacttcattgaatcccgcgagtatgaaaaaccgctgaacgtttac
ggctactcaaaaatgctgtttgacgaatatgtgcgcagcattctgccggaagcgaattca
ccggttgtcggtttccgctatttcaacgtttatggtccgcgtgaaggccacaaaggcagc
atggcaagcgtggctttccatctcaatacccaactgaacaacggtgaaagcccgaaactg
ttcgaaggtagcgataactttaagcgcgacttcgtctacgttggcgatgtggccgccgtg
aatctgtggttctgggaaaacggcgtttccggtatttataacctcggcactggccgcgca
gaatctttccaggcggttgcggatgcgacgctggcttaccataagaaaggttctattgag
tacattccgttccccgagaaactgaaaggtcgctaccaggcgtttacccaggcggatctt
actaacctgcgcaaagcgggctatgacaagccatttaaaaccgttgccgaaggcgtcacc
gagtatatggcctggctgaaccgcgacgcgtaa
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