Kosakonia radicincitans: A3780_24690
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Entry
A3780_24690 CDS
T04579
Symbol
trmE
Name
(GenBank) tRNA uridine(34) 5-carboxymethylaminomethyl synthesis GTPase MnmE
KO
K03650
tRNA modification GTPase [EC:3.6.-.-]
Organism
krd
Kosakonia radicincitans
Brite
KEGG Orthology (KO) [BR:
krd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
krd03016
]
A3780_24690 (trmE)
Transfer RNA biogenesis [BR:
krd03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
A3780_24690 (trmE)
Prokaryotic type
Methyltransferases
A3780_24690 (trmE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MnmE_helical
TrmE_N
MMR_HSR1
FeoB_N
Dynamin_N
AIG1
Ras
RsgA_GTPase
ABC_tran
Roc
AAA_28
Arf
SRPRB
Gtr1_RagA
AAA_18
Motif
Other DBs
NCBI-ProteinID:
APG20605
UniProt:
A0AAX2EXW5
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All DBs
Position
5317253..5318617
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AA seq
454 aa
AA seq
DB search
MSHNDTIVAQATPPGRGGVGILRISGVKARDVAQAVLGKLPKPRYADYLPFQDADGSALD
QGIALWFPGPNSFTGEDVLELQGHGGPVILDLLLKRILTLPGLRIARPGEFSERAFLNDK
LDLAQAEAIADLIDASSEQAARSALNSLQGAFSARVNHLVEALTHLRIYVEAAIDFPDEE
IDFLSDGKIEAQLNDVIADLDAVRAEARQGSLLREGMKVVIAGRPNAGKSSLLNALAGRE
AAIVTDIAGTTRDVLREHIHIDGMPLHIIDTAGLREASDEVERIGIERAWQEIEQADRVL
FMVDGTTTDAVDPAEIWPDFIARLPARLPITVVRNKADVTGEPLGISDVNNHSLVRLSAR
TGEGVDVLRQHLKQSMGFDTSMEGGFLARRRHLQALEAAAEHLQQGKAQLLGAWAGELLA
EELRLAQQNLSEITGEFTSDDLLGRIFSSFCIGK
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atgagccataacgacactatcgtcgcacaggcaaccccaccgggacgcggtggggtgggg
atcctgcgtatttcgggcgtaaaagcgcgagacgtggcgcaggcggtgctgggcaagctg
ccgaaaccgcgttatgccgactatctgccattccaggacgctgatggcagcgcgctggat
caaggcattgcgctgtggttcccgggcccgaactcctttaccggtgaagatgtactggag
ctacaagggcacggcggcccggtgatcctcgacctgctgttaaaacgcatactgacctta
ccggggctgcgcattgcccggccgggcgagttctccgagcgtgcgttccttaacgataag
ctcgatctggcgcaggctgaagcgattgccgatttaattgacgccagttccgaacaggcc
gcgcgctccgcactgaactcgttgcagggcgctttctctgcccgtgttaaccaccttgtg
gaagcacttactcacctgcgaatctatgtggaagcggctatcgacttcccggatgaagag
atcgacttcctttcagacggcaaaatcgaagcccagttgaacgacgttatcgccgatttg
gacgcggtacgagctgaagcgcgtcagggaagcctgttacgtgaaggaatgaaagtggtc
attgctggtcgcccaaatgcagggaaatcgagcctgttgaacgcgctggccgggcgtgaa
gccgctattgtgacggatattgcaggcaccacgcgcgacgtattgcgcgagcacatacat
atcgacggtatgccgctgcacattatcgataccgccggtttgcgcgaagccagcgacgaa
gtggaacgtatcggtatcgaacgcgcctggcaggagattgagcaggccgatcgcgtgctg
tttatggttgatggcaccaccaccgatgcggttgatccggcagaaatctggccggacttt
attgcccgtctgcccgccagattaccgatcaccgtggtacgcaataaagcggatgttacc
ggcgagccgctgggtatcagcgatgtgaacaatcactcacttgtgcgtctctccgcgcgt
accggcgaaggcgttgacgtgctgcgtcagcatctcaagcagagtatggggtttgacacc
agcatggaaggcggtttcctggcgcgtcgccggcacttacaggcgcttgaagcggccgca
gagcatctgcaacagggtaaagcgcaactgctgggtgcctgggcaggtgaattgctggcc
gaagagctgcgcctcgcgcagcagaacctgagtgagatcaccggcgaatttacctccgat
gatttgctgggccgtatcttctccagcttctgtattggtaagtaa
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