Kosakonia radicincitans: A3780_25650
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Entry
A3780_25650 CDS
T04579
Symbol
uvrD
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
krd
Kosakonia radicincitans
Pathway
krd03420
Nucleotide excision repair
krd03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
krd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
A3780_25650 (uvrD)
03430 Mismatch repair
A3780_25650 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
krd03400
]
A3780_25650 (uvrD)
Enzymes [BR:
krd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
A3780_25650 (uvrD)
DNA repair and recombination proteins [BR:
krd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
A3780_25650 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
A3780_25650 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
AAA_22
Motif
Other DBs
NCBI-ProteinID:
APG20776
UniProt:
A0AAX2EZA1
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All DBs
Position
5524599..5526761
Genome browser
AA seq
720 aa
AA seq
DB search
MDVSYLLDSLNDKQRDAVAAERSNMLVLAGAGSGKTRVLVHRIAWLMTVENCSPYSIMAV
TFTNKAAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQL
RLLKRLIKAMNLDEKQWPPRQAMWYINGQKDEGIRPHHIQSFGNPVEQTWQKVYQAYQEA
CDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDT
GKVMIVGDDDQSIYGWRGAQVENIQRFLKDFPGAQTIRLEQNYRSTSNILSAANALIENN
NGRLGKNLWTDGVDGEPISLYCAFNELDEARFVVNRIKAWQDNGGQLTQCAILYRSNAQS
RVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGD
RTLDVVRQTSRDRQLTLWQATRELLQEKALAGRAASALQRFLELIDALAQETADMPLHVQ
TDRVVNDSGLRMMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAFLSHAAL
EAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEERRLAY
VGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVEEVRLRASISRPVSHQRMG
TPAAQSDTGYKLGQRVRHAKFGEGTVVNMEGSGEHSRLQVAFQGQGIKWLVAAYAKLETV
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atggacgtttcttatctgctcgacagcctcaatgacaaacagcgcgacgccgtagccgca
gagcgcagcaatatgctggtgctggccggggcggggagcggtaagacgcgcgtgctggta
caccgtatcgcctggctgatgaccgtggagaactgctcgccgtactcgatcatggcggtc
acttttaccaataaagcggcggcggaaatgcgtcaccgtatcggtcagttgatgggcacc
tcacagggcggaatgtgggtgggcacgttccacggcctggcgcaccgcttgttgcgtgcg
caccatatggacgccaatttgccgcaggatttccagatcctcgacagtgaagatcagctc
cggttgctgaaacgcctgatcaaagcgatgaatctggatgagaagcagtggccgccacgt
caggcgatgtggtacatcaacggccagaaagatgagggcattcgtccgcatcatatccag
agtttcggtaacccggttgagcagacctggcagaaagtttatcaggcctaccaggaagct
tgcgatcgcgccgggttggtggattttgccgagctgctgctgcgcgcccatgagctgtgg
ctgaacaagccgcatattttgcagcactatcgtgaacgctttaccaatatcctggtggac
gaatttcaggatactaacaacattcagtacgcatggatccgcctgctggcgggcgacacc
ggcaaggtgatgatcgtcggcgacgatgatcagtccatttacggctggcgcggcgcgcaa
gtggaaaacatccagcgcttcctgaaagatttccccggcgcgcagaccattcgcctggag
cagaactaccgctccaccagtaatatccttagcgccgctaacgccctgattgaaaacaac
aacgggcggctggggaaaaatctgtggaccgacggcgtcgatggcgagccgatttcactc
tattgcgcgttcaacgagctggacgaagcgcgctttgtcgtaaaccgtatcaaagcctgg
caggacaacggtgggcaactgacgcagtgcgccattctctatcgcagcaacgcccagtcg
cgcgtgctggaagaggcgctgttgcaggccagtatgccgtaccgcatttatggtggtatg
cgattcttcgaacgtcaggagatcaaagatgcgctctcctatctgcgtttgatcgccaac
cgcaatgatgatgccgcgtttgagcgcgtagtgaatacgccgacgcgcggcattggcgat
cgcacgctggatgttgtgcgccagacgtcacgcgatcgtcagttgacgctgtggcaggcg
acgcgcgagctgttacaggaaaaagcactggcgggccgtgctgcaagcgccctgcaacgc
ttcctcgaactgattgacgcgctggcgcaggaaacggccgatatgccgctgcatgtacaa
accgaccgggtggtgaacgactctggtctgcgcatgatgtacgagcaggagaagggcgag
aaaggccagacgcgtattgagaacttagaggagctggtcaccgccacgcggcagttcagc
tacaacgaagaagatgaagatttaatgccgttgcaggcgtttctctctcacgccgcgctg
gaggcgggtgaagggcaggcggacacctggcaggatgcggtgcagcttatgacgctgcac
tcggcaaaaggtctggaattcccgcaggtctttatcgttggcatggaagagggcatgttc
ccgagccagatgtcgctggatgagggcggtcgtctggaagaggagcgccggctggcgtat
gtcggcgtgacgcgagcgatgcagaaactgaccctaacctacgctgaaacgcgtcgtctg
tacggaaaagaggtttatcaccgcccttcacgctttatcggcgagctgccggaagagtgt
gtggaagaggtgcgtttacgcgccagcatcagccgcccggttagtcatcagcgcatggga
acgccagccgcgcagagcgacaccggctataaacttggccaacgcgtgcgccatgcgaag
tttggcgaaggtacggtagtgaacatggaaggcagcggtgaacatagccgtttgcaggtg
gctttccaggggcagggtattaaatggctggtggccgcttatgcgaagctggaaactgtc
taa
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