Kosakonia radicincitans: A3780_25810
Help
Entry
A3780_25810 CDS
T04579
Symbol
fadB
Name
(GenBank) multifunctional fatty acid oxidation complex subunit alpha
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
krd
Kosakonia radicincitans
Pathway
krd00071
Fatty acid degradation
krd00280
Valine, leucine and isoleucine degradation
krd00310
Lysine degradation
krd00362
Benzoate degradation
krd00380
Tryptophan metabolism
krd00410
beta-Alanine metabolism
krd00640
Propanoate metabolism
krd00650
Butanoate metabolism
krd00907
Pinene, camphor and geraniol degradation
krd00930
Caprolactam degradation
krd01100
Metabolic pathways
krd01110
Biosynthesis of secondary metabolites
krd01120
Microbial metabolism in diverse environments
krd01200
Carbon metabolism
krd01212
Fatty acid metabolism
Module
krd_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
krd00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
A3780_25810 (fadB)
00650 Butanoate metabolism
A3780_25810 (fadB)
09103 Lipid metabolism
00071 Fatty acid degradation
A3780_25810 (fadB)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
A3780_25810 (fadB)
00310 Lysine degradation
A3780_25810 (fadB)
00380 Tryptophan metabolism
A3780_25810 (fadB)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
A3780_25810 (fadB)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
A3780_25810 (fadB)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
A3780_25810 (fadB)
00930 Caprolactam degradation
A3780_25810 (fadB)
Enzymes [BR:
krd01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
A3780_25810 (fadB)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
A3780_25810 (fadB)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
A3780_25810 (fadB)
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
A3780_25810 (fadB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
NAD_binding_2
Motif
Other DBs
NCBI-ProteinID:
APG20806
LinkDB
All DBs
Position
complement(5559354..5561543)
Genome browser
AA seq
729 aa
AA seq
DB search
MLYKGNNLYLNWLEDGIAELVFDAPGSVNKLDTATVASLGEALAVLEKQSDLKGLLLRSE
KAAFIVGADITEFLSLFLVPEEQLSQWLHFANSVFNRLEDLPVPTISAVNGYALGGGCEC
VLATDYRLATPDLRIGLPETKLGIMPGFGGSVRMPRLLGADSALEIIAAGKDVDAEQALK
IGLVDGIVKPEKLREGAIAILRQAINGDLDWKAKRQPKLEPLKLSKIEAAMSFTIAKGMV
MQTAGKHYPAPITAVKTIEAAARFGRDEALKLENQSFVPLAHTNEARALVGIFLNDQYVK
GQAKKLTKNVETPKQAAVLGAGIMGGGIAYQSAWKGVPVLMKDINEKSLALGINEAGKLL
NKQLERGKIDGLKLASVIATIQPTLEYAGFERADVVVEAVVENPKVKKAVLAETEDKVRP
DTVLASNTSTIPISELASVLKRPENFCGMHFFNPVHRMPLVEVIRGEKTSDETIAKVVAW
ASKMGKTPIVVNDCPGFFVNRVLFPYFAGFSQLLRDGADFRKVDKVMEKQFGWPMGPAYL
LDVVGIDTAHHAQAVMAAGFPQRMQKDYRDAIDALFDAHRFGQKNGLGFWRYKEDSKGKP
KKEEDSAVDSMLAEISKGKQDFSDEEIIVRMMIPMVNEVVRCLEEGIIASPAEADMALVY
GLGFPPFHGGAFRWLDTLGSAKYLDMAQHYQHLGPLYEVPAGLREKARRNEPYYPAVEPA
RPVGELKTA
NT seq
2190 nt
NT seq
+upstream
nt +downstream
nt
atgctctacaaaggcaataacctgtacctaaactggctggaagatggcatcgcggaactg
gtattcgatgcgcccggctcagttaacaagcttgataccgccaccgtcgccagccttggc
gaagcgctggccgtactggaaaagcaatcagatttaaaagggctgctgctgcgttcagag
aaagcggcctttattgtcggggccgatatcaccgaattcctctccctgttcctcgtgccg
gaagagcagttgagccagtggctgcactttgccaacagcgtgtttaaccgcctggaagat
ttgcccgtcccaacgatctccgcggtgaatggctatgcgctcggtggcggctgcgaatgc
gtgctggcgacagactatcgcctggcgacgccggacctgcgtattggcctgccggaaacc
aaacttggtatcatgccaggctttggcggttcagtacgcatgccacgcctgctgggtgca
gacagcgcactggaaatcatcgcggccgggaaagatgtcgatgccgaacaagcgctgaaa
atcggcctggtggatggcattgtgaagccggaaaaactgcgtgaaggtgccattgccatt
ctgcgacaggccattaacggcgatctggactggaaagcaaaacgtcagccgaagctggag
ccactgaagctcagcaaaattgaagctgccatgagctttactattgccaaaggcatggtg
atgcaaacagccgggaagcactatccggcaccgatcacggcggtcaaaaccattgaagct
gcggcaagatttggccgcgacgaagcgctgaagctggaaaaccagagcttcgttccgctc
gcccataccaacgaggcccgtgcgctggtcgggattttcctgaacgaccaatatgtaaaa
ggtcaggcgaagaaactgaccaaaaatgtcgaaacgcccaaacaagctgcggtacttggc
gcaggcattatgggcggcggcattgcttaccagtcagcctggaaaggcgtaccggtatta
atgaaggatatcaacgagaaatcccttgcactcggcattaatgaagcaggcaagctgctg
aacaaacagctcgagcgcggcaaaatcgatggtctaaaactggccagcgtgattgcgacc
attcagccaacactggagtatgccggttttgaacgcgccgacgtggtggtcgaagcggtc
gtggaaaacccgaaagtgaaaaaagcggtgctggcggaaacagaggacaaagtccgtccg
gataccgtactggcatcaaatacctccaccattcccatcagtgaactcgccagcgtgctg
aaacgcccggaaaatttctgcggcatgcacttcttcaacccggtacaccgtatgccgctg
gttgaagtgattcgcggagagaaaacgtccgatgaaaccatcgccaaagtagtggcctgg
gcgagcaaaatgggcaaaacgccgatcgtggtcaatgactgcccaggtttcttcgtcaac
cgcgtactgttcccttactttgccgggtttagccagttgctgcgcgacggcgcggatttc
cgcaaagtcgacaaagtgatggagaagcagttcggctggccgatgggcccggcgtatctg
ctggatgttgtgggtattgataccgcacatcacgcccaggcggtgatggcggccggtttc
ccgcagcgcatgcagaaagattatcgcgatgccatcgatgcgctgtttgacgcacaccgt
ttcgggcagaaaaacgggctcggtttctggcgctataaagaagacagcaaaggcaaaccg
aagaaagaagaagacagcgccgttgacagcatgctggccgaaatcagcaaaggcaaacag
gatttcagcgatgaagagattattgtccgcatgatgattccaatggtcaatgaagtggtg
cgttgtctggaagaagggattatcgccagccctgccgaagcggatatggcgctggtgtat
ggtcttggcttcccgccgttccacggcggcgcgttccgctggctggatacgcttggcagc
gcaaaatacctcgatatggcacagcactatcagcatctcgggccgctgtatgaagtaccg
gcggggctgcgcgaaaaagcgcgccgcaacgagccttattaccctgcggtagaacctgcg
cgcccagtgggcgagttaaaaacggcttaa
DBGET
integrated database retrieval system
