Kosakonia radicincitans: A3780_25985
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Entry
A3780_25985 CDS
T04579
Name
(GenBank) phosphomethylpyrimidine synthase ThiC
KO
K03147
phosphomethylpyrimidine synthase [EC:
4.1.99.17
]
Organism
krd
Kosakonia radicincitans
Pathway
krd00730
Thiamine metabolism
krd01100
Metabolic pathways
krd01240
Biosynthesis of cofactors
Module
krd_M00127
Thiamine biosynthesis, prokaryotes, AIR (+ DXP/tyrosine) => TMP/TPP
Brite
KEGG Orthology (KO) [BR:
krd00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
A3780_25985
Enzymes [BR:
krd01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.17 phosphomethylpyrimidine synthase
A3780_25985
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiC_Rad_SAM
ThiC-associated
Motif
Other DBs
NCBI-ProteinID:
APG20831
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All DBs
Position
complement(5595676..5597571)
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AA seq
631 aa
AA seq
DB search
MSAKTVTRREQRAQAQHFIDTLEGTAFPNSQRIYITGSQPDIRVPMREIQLSPTLIGGTK
AQPQYEENEAVPVYDTSGPYGDPAIAINVQQGLAKLRAPWITARNDTETLDERSSAYTKE
RLADDGLDELRFGGLLTPQRAKAGRCVTQLHYARQGIVTPEMEFIAIRENMGRERIRSEV
LRRQHPGEGFGARLPENITPEFVRDEVAAGRAIIPANINHPESEPMIIGRNFLVKVNANI
GNSAVTSSIEEEVEKLVWATRWGADTVMDLSTGRYIHETREWILRNSPVPIGTVPIYQAL
EKVNGIAEDLNWQAFRDTLLEQAEQGVDYFTIHAGVLLRYVPMTARRLTGIVSRGGSIMA
KWCLSHHQENFLYTHFREICEICAAYDVALSLGDGLRPGSIQDANDEAQFAELHTLGELT
KIAWEYDVQVMIEGPGHVPMQMIRRNMTEELEHCHEAPFYTLGPLTTDIAPGYDHFTSGI
GAAMIGWFGCAMLCYVTPKEHLGLPNKEDVKQGLITYKIAAHAADLAKGHPGAQIRDNAM
SKARFEFRWKDQFNLALDPFTARAYHDETLPQESGKVAHFCSMCGPKFCSMKISQEVRDY
AASQAIEVGMADKSNDFRARGGEIYLKREEA
NT seq
1896 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcaaaaactgttacacgccgtgaacaacgcgcccaggcgcaacacttcattgat
acgctggaaggcaccgctttccccaattcgcaacgcatttacatcaccggttcgcagccg
gatattcgcgtgcccatgcgtgaaatccagcttagcccgacgcttatcggcggcaccaaa
gcacagccgcaatatgaagaaaacgaagccgtaccggtgtatgacacctccggcccgtat
ggcgatccggctatcgccattaatgtgcaacaggggctggcaaagctgcgtgcgccgtgg
ataaccgcccgtaacgacactgaaacgctcgatgaacgcagctctgcgtacaccaaagag
cggctggccgatgacggcctcgatgagctgcgttttggcggtttgctgacgccgcaacgc
gccaaagcgggccgctgcgtgacgcagttgcactatgctcgccaggggatcgtgacgccg
gaaatggaatttatcgctatccgtgaaaacatgggccgcgagcgcatccgcagcgaagtg
ctgcgcaggcagcatccgggcgaaggttttggcgcacgcctgccggaaaatatcacgccg
gaatttgtccgcgatgaagtggcggccggtcgcgccattattcccgccaatattaaccac
ccggagtcggaaccgatgattatcggccgcaacttcctggttaaagtgaacgccaatatc
ggcaactcggcggtaacctcttccatcgaagaagaggtggaaaaactggtctgggcaact
cgctggggcgcggacacggtgatggatctctccaccggacgttatatccatgaaacccgc
gaatggatcctgcgtaacagcccggtgccgatcggtaccgtgccgatctatcaggcgctg
gagaaggtcaacgggatcgccgaagatctgaactggcaggcgttccgcgacacactgctg
gagcaggcggaacaaggggtggattacttcaccattcacgcaggtgtgctgctgcgttac
gtcccgatgaccgcccgccgtctgaccggcattgtttcgcgcggcggttcgattatggcg
aaatggtgcctttcccatcatcaggagaacttcctttacacccacttccgcgaaatctgc
gagatctgcgccgcttacgacgttgcattgtcgctgggcgatggtctgcgtccgggttcc
attcaggacgccaacgacgaagcgcaattcgcggagctacacacgttgggcgagctaacc
aaaatcgcctgggagtacgacgtacaggtgatgattgaaggtccggggcatgtgccgatg
cagatgatccgccgcaatatgactgaagaactggagcactgccacgaagcgccgttctac
acgcttggaccgctcaccactgatatcgcaccgggttacgaccacttcacctccggcatt
ggcgcggcgatgattggctggtttggctgcgcgatgctgtgttatgtcacgccaaaagag
catcttggcctgccgaacaaagaggatgtgaaacaggggcttattacctataagatcgcc
gcccacgcggctgacctcgccaaaggccatcccggcgcgcagatccgcgataatgccatg
tcgaaagcgcgctttgagttccgctggaaagaccagtttaatctggcgctcgaccccttc
accgcccgcgcgtatcacgatgaaaccctgccgcaggaatccggcaaagtcgcccacttc
tgctcgatgtgcgggccgaaattctgctcaatgaaaatctcccaggaagtacgcgattat
gccgcttcccaagctattgaagttggcatggcagacaagtcgaacgacttccgcgcccgc
ggcggcgagatctacctgaaacgggaggaagcctga
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