Komagataeibacter rhaeticus: GWK63_04430
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Entry
GWK63_04430 CDS
T06497
Name
(GenBank) ATP-dependent RecD-like DNA helicase
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
kre
Komagataeibacter rhaeticus
Pathway
kre03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
kre00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
GWK63_04430
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
kre03400
]
GWK63_04430
Enzymes [BR:
kre01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
GWK63_04430
DNA repair and recombination proteins [BR:
kre03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
GWK63_04430
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
HHH_RecD2
OB_YrrC
SH3_13
UvrD_C_2
HHH_5
Viral_helicase1
AAA_11
HHH_2
PIF1
Helicase_RecD
TraI_hel_assoc_N
nSTAND3
AAA_16
RsgA_GTPase
NTPase_1
MeaB
AAA_29
SLFN-g3_helicase
DEAD
NPHP3_N
AAA_22
UvrD-helicase
ABC_tran
AAA_28
ATP_bind_1
AAA
AAA_23
T2SSE
cobW
NACHT
TsaE
AAA_24
MMR_HSR1
ABC_ATPase
NB-ARC
IstB_IS21
AAA_26
MobB
TrwB_AAD_bind
AAA_14
HHH
Motif
Other DBs
NCBI-ProteinID:
QIP34831
UniProt:
A0A858JDN0
LinkDB
All DBs
Position
950288..952474
Genome browser
AA seq
728 aa
AA seq
DB search
MSGRAIDSSPTEALAGLVERVTFHNAENGFCVLRVKVRGQRDLVTVVGHAAMISAGEFVQ
MSGRWFNDHTHGLQFKAEFLKASPPTTVEGIERYLGSGMIRGIGPVYAKKLVKAFGEAVF
DLIEQEPGRLREVTGIGPKRAERIVGGWADQKVIREIMLFLHSNGVGTSRAVRIFKTYGQ
DAVQLISENPYRLAKDIRGIGFKTADQIARKMGIAADAMIRVRAGISYALGEAMDEGHCG
LPVRELLTSTAELLEVAAPLIETALTLELEAGDVIADSVGETGCIFLAGLYRAEQSIAER
LRACVVGRPPWPEIDAGKAMTWVERKTGLALAPSQQEAVRLALNSKVLVITGGPGVGKTT
LVNAILKIVTAKGTDVQLCAPTGRAAKRLSESTGLEGKTIHRLLETDPASGTFKRDDTNP
LTCDLLVVDEASMVDVLLMRSLLRALPDNAALLIVGDVDQLPSVGPGQVLADIIGSNAVP
VVRLTEVFRQAAQSRIITNAHRINESRMPELSAEEGSDFYFVEAAEPEVGLRKLLAVVRD
RIPARFGLDPVRDVQVLCPMNRGGLGARSLNIELQQALNPPDEVKVERFGWTYGPGDKVM
QIANDYDRDVFNGDLGVIGRIDVEEGELTVSFDGRDVVYGFGELDELVLAYATTIHKSQG
SEYPAVVIPLVTQHYAMLARNLLYTGVTRGRKLVVLVGQKKALAIAVRNQGGRRRWSKLR
EWLAGSFA
NT seq
2187 nt
NT seq
+upstream
nt +downstream
nt
atgagcgggcgcgccatcgactcttcgcccacggaagcgctggctggcctcgtggagcgg
gtgacgttccacaacgccgagaacggcttctgcgtcctgcgggtgaaggtgcgggggcag
cgcgatctggtcactgttgtcggccatgccgccatgatctcggcaggcgagttcgtgcag
atgtcggggcgctggttcaatgatcacacccacgggttgcagttcaaggcggagtttctc
aaagccagtccgccgaccacggttgaggggatcgagcgctatcttggctccggcatgatc
cggggcatcggtccggtctacgcgaagaagctggtgaaagcgttcggcgaggcggtgttc
gacctgatcgagcaggaacctggacgtctgcgggaggtgacgggcatcggccccaagcgg
gccgaacggattgtcggtggctgggcggaccagaaggtgatccgcgagatcatgctgttt
ctgcacagcaacggcgtcggcacctcgcgggcggtaaggatcttcaagacctacgggcag
gacgcggtccaactgatcagcgagaacccctaccggctcgcgaaggacatccgggggatc
ggcttcaagaccgccgaccagattgcccggaagatggggattgcggccgacgccatgatc
cgggtgcgggccgggatctcctacgcgcttggcgaggccatggatgaggggcattgtggc
ctgccggtccgggagttgctgaccagcaccgccgaactgctggaggtcgcggcacccctg
atcgagacggctctcacgttggagctggaggcgggcgacgttattgccgacagcgtgggc
gagacgggatgcatcttcctggcgggtctctatcgcgcggagcagagcatcgccgagcga
ttgcgtgcctgtgtcgtcggccgtccgccctggcccgagatcgacgctggaaaggccatg
acctgggtggaacggaagaccgggcttgcgctcgcgcccagccagcaggaggcggtgcgc
cttgccctgaacagcaaggtgctggtgatcacgggtggtcctggcgtgggcaagaccacg
ctggtcaacgccatcctgaagatcgtgaccgccaagggcacggacgtgcagctctgcgcc
ccgaccggtcgggcggcgaagcgcctgtcggaaagcaccggactggaaggcaagaccatc
catcgactgctggagacggatccggccagtggcaccttcaagcgggatgataccaacccg
ctgacctgcgatctgctggtcgtggacgaggccagcatggtcgatgtgctgctgatgcga
tccctgctgcgcgccttgcctgacaacgccgcgttgctgatcgtcggcgatgtggaccag
ttgccgtcggtcgggccggggcaggtgctggccgacatcatcggctccaacgccgtgcct
gtggtgcggctgaccgaggtgttccgtcaggcggcacagagccggatcatcaccaatgcg
catcggatcaacgagagcaggatgcccgaactgagcgcggaagagggatcggatttctac
ttcgtggaggcggccgagcccgaggtcgggctgcgcaagttgctggccgtggtgagggat
cgcatcccggcgcggttcgggctggaccctgttcgcgacgtgcaggtgctttgcccgatg
aaccggggtggccttggggcgcggtcgctgaatatcgaattgcagcaggcgctgaacccg
ccggacgaggtgaaggtcgagcggttcggctggacctatggtccgggcgacaaggtgatg
cagatcgccaacgattatgaccgggatgtcttcaatggagacctcggcgttatcggcagg
atcgatgtggaagagggcgaactgacggtctcattcgatggacgggatgtcgtttatggc
ttcggcgagttggacgaactggtgctggcctacgccaccaccatccacaagagccagggc
tcggaatacccggcggtggtgattccgctggtgacgcagcattacgccatgctggcgcgg
aacctgctctacaccggcgtcacacgggggcggaagctcgtcgtgctcgtgggccagaag
aaggcgcttgctatcgccgtgcgcaatcagggtggcaggcgacggtggtcgaagctcagg
gagtggcttgcgggtagttttgcatga
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