Komagataeibacter rhaeticus: GWK63_10155
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Entry
GWK63_10155 CDS
T06497
Name
(GenBank) DEAD/DEAH box helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
kre
Komagataeibacter rhaeticus
Pathway
kre03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
kre00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
GWK63_10155
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
kre03019
]
GWK63_10155
Enzymes [BR:
kre01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
GWK63_10155
Messenger RNA biogenesis [BR:
kre03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
GWK63_10155
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CHASE8
YbbR
AAA_22
DUF6937
Motif
Other DBs
NCBI-ProteinID:
QIP35775
UniProt:
A0A181CC08
LinkDB
All DBs
Position
complement(2234209..2235546)
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AA seq
445 aa
AA seq
DB search
MTTFADLHLAEPLLRALDEEGYTQPTPIQAGAIPYLLEGRDLLGLAQTGTGKTAAFALPI
LDRLFREKGRAHPKGARALVLAPTRELASQIGESFASYARHMRFSHAVVFGGVGQGRQIE
ALRRGVDVLVAAPGRLLDLMGQGHVDLSGLEVLVLDEADRMLDMGFVRDIRKIVAALPTD
RQTLLFSATMPKSISDLAHGLLRDPATVQVTPPSSTVDRIRQAVMFVDTANKREALKLLV
DSPKVERAVVFTLMKHEANKVAAFLGEHGITAEAIHGNKSQGARERAMSGFRSGNVKVLV
ATDIAARGIDVDDVTHVFNYDLPNVPESYVHRIGRTARAGREGWAVSLCDAEQRAWLRDI
EKNIGKAIPVVSEHPYHSEAAEHSTMRPPVLGGGGRGRGGGGRPGGGRPPGGGRPAGGGR
PPGGGRGGRPGGGGNRQGSAGRRAV
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atgacaacgtttgccgatcttcatcttgcagagccgctgctgcgcgcactggacgaggaa
ggctacacccagcccacccccattcaggctggcgccattccctacctgctggaagggcgt
gacctgctgggtctggcacagaccggcacgggcaagaccgcggccttcgcgctgcccatc
cttgaccgtcttttccgtgaaaagggccgggcccaccccaagggtgcgcgcgccctggtg
ctcgcccccacccgtgaactggcatcccagatcggggaaagcttcgcatcctatgcccgc
cacatgcgcttcagccatgccgtcgtgtttggcggcgtggggcaggggcgccagatcgag
gccctgcgccgtggcgtggacgtgctggtcgcggcccccggccgcctgctggacctgatg
ggccaggggcatgttgacctgtccggccttgaagtgctggtgctggacgaagccgaccgt
atgctcgacatgggtttcgtgcgcgacatccgcaagattgtcgcggccctgcccaccgac
cggcagacgctgctgttctcggccaccatgcccaagagcatttctgacctggcgcacggc
ctgctgcgtgacccggcaaccgtgcaggtcacgccgccgtccagcacggtggaccgcatt
cgtcaggcagtgatgtttgtcgataccgccaacaagcgcgaggcgctgaagcttttggtg
gactcgcccaaggtcgagcgcgccgtggtgttcacgctgatgaagcatgaagccaacaag
gtcgccgccttcctgggcgagcacggcatcacggccgaagccattcacggcaacaagtca
cagggcgcgcgtgagcgtgccatgtccggcttccgctcgggcaatgtgaaggtgctggtg
gccaccgacatcgcggcccgcggcattgatgtcgatgacgtgacccacgtgttcaactac
gacctgcccaacgtacccgaaagctacgtgcaccgcatcggccgcaccgcgcgcgcgggg
cgcgagggctgggccgtgtcgctgtgcgatgcggaacagcgtgcctggctgcgtgatatc
gagaagaatatcggcaaggccattcccgtggtgtccgaacatccgtaccattccgaagcg
gccgaacactccaccatgcggccgcccgtgctgggcggcggtggccggggccgtggcggc
ggtggccggcctggcggtggcaggccccccggtggtggccgtccggctggtgggggcagg
ccccccggcggcggccgtggtggccgccccggtggcgggggcaaccgccagggcagcgcg
ggtcgccgcgcggtctga
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