Komagataeibacter rhaeticus: GWK63_10190
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Entry
GWK63_10190 CDS
T06497
Name
(GenBank) ribonuclease J
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
kre
Komagataeibacter rhaeticus
Pathway
kre03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
kre00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
GWK63_10190
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
kre03019
]
GWK63_10190
Messenger RNA biogenesis [BR:
kre03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
GWK63_10190
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_2
RMMBL
Lactamase_B
RNase_J_C
Motif
Other DBs
NCBI-ProteinID:
QIP35782
UniProt:
A0A181CBY5
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All DBs
Position
complement(2245038..2246681)
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AA seq
547 aa
AA seq
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MNDVTGVSFLPLGGTGEIGMNLNLYRQGETWLAVDCGIGFSGNDTPEAEIILPDPVFIAE
RRKALAGLVVTHAHEDHLGAIAHLWPQLGCPVYVTPFAAAVLRRKLGEAGLVQQVPIHVI
APGGAFTVGPFDLRFVSVTHSVPESQSLVLRTPQGIIIHTGDWKIDPDPQVGPPTDLETF
AELGREGVLAMVCDSTNVRTEGPSASEADVRREMTRLIASLEGRIAVTCFASNVARVETL
AKAAQAAGRRVAVVGRSLRNLEVAARECGYLSDVPQFLSEQDANSVPDGQILLIVTGSQG
EPRSALSRIASDTHPNISLGEGDTVIYSSRMIPGNEQAVIQVQDNLTRRGVHVITDKDHL
VHVSGHATGGDVRRLYDLVRPRFLIPVHGEWRHLTANAAIAQELDIEPVLLEDGDILDIR
ADGVEIGDTAPTGRLVLDGGRILPMNGGVLAARRRMLFNGMVLGSFAVDDEGYLIGDPKV
SAPGLLDMEDPETQRVTEEFGNALDEIPDELRANDATFREAAKTALRRALGRKLQKRPLV
DVHLLRV
NT seq
1644 nt
NT seq
+upstream
nt +downstream
nt
atgaatgatgtaacaggcgtttcatttcttccgctaggcggaaccggcgaaattggcatg
aacctcaacctgtaccggcagggcgagacatggctggcggtggactgtggcatcggcttc
agcggcaatgacacgcccgaggccgagatcatcctgcccgatccggtcttcatcgccgaa
cgcaggaaggcgctggcggggctggtggtcacccacgcgcatgaggaccatctgggcgcc
atcgcccatctgtggccgcagcttggctgtccggtctatgtcaccccgtttgccgccgcc
gtgctgcgccgcaagctgggtgaggcggggctggtccagcaggtgccgatccacgtcatc
gcccccggcggcgcctttacggtcgggccgtttgacctgcgcttcgtctcggtcacccat
tcggtgccggaatcgcagtcgctggtgctgcgtacgccgcagggcatcatcatccatacc
ggtgactggaagatcgaccccgacccgcaggtcggcccccccaccgaccttgaaaccttt
gccgaactggggcgcgagggcgtgctggccatggtgtgcgacagcaccaatgtccgcacc
gaagggccttccgcatccgaagccgatgtaaggcgcgagatgacccgcctcatcgcctcg
cttgaggggcggatcgcggtgacctgctttgccagtaacgtcgcccgcgtggaaacgctg
gccaaggccgcgcaggccgctggccgccgcgtggccgtggtgggccgcagcctgcgcaac
ctggaggtcgcggcgcgggaatgtggctacctgtccgacgtgccgcagttcctgtccgag
caggatgccaattccgtgcccgatggccagatcctgctgatcgtgaccggcagccagggg
gagccgcgctccgccctgtcgcgcatcgcgtccgacacccaccccaacatctcgctgggg
gaaggcgatacggtcatctacagcagccgcatgatccccggtaacgagcaggccgtgatc
caggtgcaggacaacctgacccgtcgcggcgtgcatgtgattacggacaaggaccacctt
gtgcatgtgtccggccatgcaacgggtggtgacgtgcgcaggctgtatgaccttgtgcgc
ccgcgcttcctgatcccggtgcatggcgaatggcgccacctgaccgccaatgccgccatt
gcgcaggaactggatatcgagccggtgctgctggaagatggcgacatcctggatatccgc
gccgatggcgtggaaattggcgataccgcgcccaccgggcggctggttctggatggcggg
cgtatcctgcccatgaatggcggcgtgctggccgcgcggcggcgcatgctgttcaacggc
atggtgctgggcagctttgcggtggatgacgagggctacctgattggtgacccgaaggtc
agcgccccgggcctgctggacatggaagaccccgagacccagcgggttacggaagaattc
ggcaatgcgctggacgagatccccgatgagctgcgggcgaatgacgcaaccttccgcgag
gcggcgaaaaccgccctgcgccgcgcccttggccgcaagctgcagaagcgcccgctggtg
gatgtgcacctgctgcgcgtctga
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