Komagataeibacter rhaeticus: GWK63_10890
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Entry
GWK63_10890 CDS
T06497
Symbol
rpoD
Name
(GenBank) RNA polymerase sigma factor RpoD
KO
K03086
RNA polymerase primary sigma factor
Organism
kre
Komagataeibacter rhaeticus
Brite
KEGG Orthology (KO) [BR:
kre00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
GWK63_10890 (rpoD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
kre03021
]
GWK63_10890 (rpoD)
Transcription machinery [BR:
kre03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
GWK63_10890 (rpoD)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_ner
Sigma70_r3
Sigma70_r1_1
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Motif
Other DBs
NCBI-ProteinID:
QIP35909
UniProt:
A0A181CCC3
LinkDB
All DBs
Position
complement(2384616..2386595)
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AA seq
659 aa
AA seq
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MATKTATGTDTASGDQDNDTTLLDTRSGAVKKLIARGKERGYITFDELNAVLPQDQMSSE
QIEDVMAALSEMGMQVVENEDNDDTEAAATADTKGDDTAEEESESEEPAAGNVDTESLGR
TDDPVRMYLREMGSVELLSREGEIAIAKRIEAGRDEMIGGLCESPLTFRAIISWHERLKA
GEMLLRDIVDLEAMQSGGNDPAEAVEGEDAFAENDGNEAEEAEETEGEGEGEGEGAGLSL
SALEEKLKPEILEQFKEVEALYEALHRVQAERLEKFTAGSDISAEEESRYEQLRLELVGK
VQQVHLHNARIEVLVEHLKEIFQRLNGLEGRMLRLAESTRVSRDDFLLKYRGRELDPGWM
DMAAALPGKSWKNFIAKHGETVIRLRNQVADLTQETGLPVGEFRRVYATVSRGERDSARA
KKEMIEANLRLVISIAKKYTNRGLQFLDLIQEGNIGLMKAVDKFEYRRGYKFSTYATWWI
RQAITRSIADQARTIRIPVHMIETINKLVRTSRQMLHEIGREPAPEELAEKLGMPLEKVR
KVLKIAKEPISLETPIGDEEDSHLGDFIEDKAAVIPLDAAIQTNLREATTRVLSSLTPRE
ERVLRMRFGIGMNTDHTLEEVGQQFNVTRERIRQIEAKALRKLKHPSRSRKLRSFLDDN
NT seq
1980 nt
NT seq
+upstream
nt +downstream
nt
atggcgacaaagacagccacgggtacggacacggcttcgggggatcaggataacgataca
accctgctggacacccggtccggcgccgtcaagaaactgatcgcccgcggcaaggaacgc
ggttacatcacgttcgatgaactcaatgccgtccttccgcaggaccagatgtcctcggaa
cagatcgaggacgtgatggccgccctgtcggaaatgggcatgcaggttgtcgagaacgag
gataacgacgacaccgaggccgcggccaccgccgacaccaagggtgacgacaccgccgag
gaagagagcgagagcgaggaaccggcggcgggcaacgtcgataccgaaagccttggccgc
accgatgacccggtgcgcatgtacctgcgtgagatgggttcggtcgaactcctgtcgcgt
gagggcgagatcgcgatcgccaagcggatcgaggctggccgtgacgagatgatcggcggc
ctgtgtgaaagcccgctgaccttccgcgccatcatttcgtggcatgaacggctcaaggcc
ggtgagatgctgctgcgcgacatcgtggacctggaggccatgcagtccggcggcaatgac
cccgccgaggcggtggaaggcgaggatgcctttgccgaaaatgacggcaacgaggccgag
gaagccgaggaaaccgaaggcgagggcgagggggaaggcgagggggccggcctgtcgctt
tcagcacttgaggaaaagctgaagcccgagatcctggagcagttcaaggaagtcgaggcg
ctgtacgaggcgctgcaccgcgtgcaggccgagcggctggaaaaattcaccgccggcagc
gacatctcggccgaggaggaaagccgctacgagcagctgcgcctggaactggtgggcaag
gtccagcaggtccatctgcacaatgcgcgtatcgaggtgctggtcgagcacctgaaggaa
atcttccagcgcctgaacgggctggaaggccgcatgctgcgcctggccgagagcacgcgc
gtctcgcgcgatgacttcctgctcaaataccgtgggcgcgaactggaccccggctggatg
gacatggcggcggccctgccgggcaagtcatggaagaacttcatcgccaagcatggcgag
accgtgatccgcctgcgcaaccaggtggccgaccttacacaggaaaccggcctgccggtg
ggtgagttccggcgcgtttacgccaccgtctcccgcggggagcgggattcggcgcgcgcc
aagaaggagatgatcgaggccaacctgcgcctcgtgatctcgattgccaagaaatacacc
aatcgcggcctgcagttccttgacctgatccaggaaggcaatatcggcctgatgaaggcg
gtggacaaattcgaataccgccgtggctacaagttctccacctacgccacatggtggata
cgccaggccatcacgcgttcgatcgcggatcaggcgcggaccatccgtatcccggtccac
atgatcgagacgatcaacaagctggtccgtacctcgcgccagatgctgcatgagatcggg
cgtgagccggcccccgaggaactggccgaaaagctgggcatgccgctggaaaaggtgcgc
aaggtgctcaagatcgccaaggagccgatctcgctcgaaaccccgatcggggacgaggaa
gacagccatcttggcgacttcatcgaggacaaggccgccgtcatcccgcttgatgccgcg
atccagaccaacctgcgcgaggccacgacgcgggtgctctcctcgctcaccccgcgtgag
gaacgtgtgctgcgcatgcgctttggcatcggcatgaataccgatcacacgctggaggaa
gtgggccagcagttcaacgtgacccgtgagcgtatccgccagatcgaggccaaggccctg
cgcaagctcaagcatcccagccggagccgcaagctgcgctcgttccttgatgataactga
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