Komagataeibacter rhaeticus: GWK63_11230
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Entry
GWK63_11230 CDS
T06497
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
kre
Komagataeibacter rhaeticus
Pathway
kre03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
kre00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
GWK63_11230 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
kre03021
]
GWK63_11230 (rpoC)
03400 DNA repair and recombination proteins [BR:
kre03400
]
GWK63_11230 (rpoC)
Enzymes [BR:
kre01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
GWK63_11230 (rpoC)
Transcription machinery [BR:
kre03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
GWK63_11230 (rpoC)
DNA repair and recombination proteins [BR:
kre03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
GWK63_11230 (rpoC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Biotin_lipoyl_2
RPOC_hybrid
Apocytochr_F_C
DUF5789
Motif
Other DBs
NCBI-ProteinID:
QIP35973
UniProt:
A0A181CCI7
LinkDB
All DBs
Position
complement(2452094..2456290)
Genome browser
AA seq
1398 aa
AA seq
DB search
MNELMKILGQGGQAMTFDQIKIQLASAEQIRSWSYGEIKKPETINYRTFKPERDGLFCAR
IFGPIKDYECLCGKYKRMKFRGIICEKCGVEVTLAKVRRERMGHIELASPVAHIWFLKSL
PSRIGLMVDMTLKDLEKILYFESYVVLEPGTSPLKQYSLLTEDQYLDVMDEHGDEGIEVG
IGAEAIKKILERIDCRQEKEELRQELKETTSEAKRKKLVKRLKLVEAFADSDSRPEWMIL
ELVPVIPPELRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLIELRAPDIIVRNEKRML
QESVDALFDNGRRGRAITGANKRPLKSLSDMLKGKQGRFRQNLLGKRVDYSGRSVIVVGP
ELKLHQCGLPKKMALELFKPFIYSKLEKYGHATTIKAAKRMVEKERPEVWDILEEVIREH
PVMLNRAPTLHRLGIQAFEPVLIEGKAIQLHPLVCTAFNADFDGDQMAVHVPLSLEAQLE
ARVLMMSTNNILSPANGKPIIVPSQDIVLGLYYLSLETPEFRATPDQNSYDDKGHLTVAG
APSFSSVGEVEYALSTGAVKLHDKIRARIETLDADGKPARTTVVTTPGRMLVAQILPRHA
ALPFSLINRQLTKKIVSDVIDAVYRHCGQKECVIFCDRLMGLGFRHAAKSGISFGKDDMI
VPAEKKELVDRTAAEVKEFEQQYQDGLITAGERYNKVVDAWSRCTDEVQAAMMKEISKQE
IGKPTNSVWMMSHSGARGSPAQMKQLAGMRGLMAKPSGEIIEQPIIANFKEGLSVLDYFT
SSHGARKGLADTALKTANSGYLTRRLVDVAQDSIIVEEDCGTERGLTVRAVMDGGEVIAS
LSERMLGRTLAADVLDPATGKVLFPRNTLIEEAQAEQIEKAGVESLLIRSVLTCDSRVGV
CGHCYGRDLARGTPVNIGEAVGVIAAQSIGEPGTQLTMRTFHIGGAAQRGAEQSMVEASR
DGKVTIRNKNVVHNSQNVPIVMSRNCEILLTDDRGTERARYRVPYGARLLVEDGAAVTRG
QKMAEWDPYTLPIITEQPGKVEYLDLIDSITLVERMDEVTGLTSKVVVDYKQASKGIDLR
PRLQLKDANGDVVKLANGNDARYFLSPDSLLSVENGAQVNAGDVLARIPREGSKTRDITG
GLPRVAELFEARRPKDHAIISETEGRVEFGKDYKSKRRVIVKNDETGEETDYLIPKGKHV
SVQEGDFVQVGDPLVDGPRVPHDILKVLGVEALSDYLVNEIQDVYRLQGVKINDKHIEVI
VRQMLQKVEILEPGDTTYLIGETVDRIEYEEENTKRLNMGERPAAAMPVLQGITKASLQT
QSFISAASFQETTRVLTEAATAGKKDTLNGLKENVIVGRLIPAGTGSVMNKLRAVAAGED
KQRLAQARAAVATTKAAE
NT seq
4197 nt
NT seq
+upstream
nt +downstream
nt
atgaatgaactcatgaagatccttggccagggcggccaggccatgaccttcgaccagatc
aagatccagctggcttcggccgagcagatccgctcatggtcgtatggcgagatcaagaag
cccgagaccatcaactaccggaccttcaagccggagcgtgatggcctgttctgtgcacgg
atattcggtccgatcaaggattacgaatgcctgtgcggcaagtacaagcggatgaaattc
cgtggcatcatctgcgaaaaatgcggtgtggaagtcacgctggcgaaggtccgccgcgag
cgcatgggccatatcgagcttgccagtcccgtagcccatatctggttcctcaagtcgctg
cccagccgtatcggcctgatggtcgacatgacgctgaaggatctggaaaagatcctgtat
ttcgagagctatgtggttctggagcccggcacgtcgccgctcaagcagtacagcctgctg
accgaagaccagtatcttgatgtcatggacgagcatggcgacgaggggatcgaggtcggg
atcggtgccgaagcgatcaagaagatccttgaacgcatcgactgccgtcaggaaaaggaa
gaactgcgtcaggagctgaaggaaaccacatccgaagccaagcgcaagaagctggtcaag
cggctgaagctggtcgaggcctttgccgacagtgattcccgtccggaatggatgatcctg
gaactggtgccggtcatcccgcccgagctgcgcccgctggtgccgcttgatggcggccgc
ttcgccacgtccgacctgaacgacctgtaccgccgtgtcatcaaccgtaacaaccgcctc
aagcggctgatcgaactgcgcgcgccggacatcattgtccgtaacgaaaagcgcatgctg
caggaatcggttgatgcgctgttcgataatggccgccgtggccgcgccatcacgggggcg
aacaagcgcccgctgaagtcgctgtcggacatgctgaagggcaagcagggccgcttccgc
cagaacctgctgggcaagcgcgtcgactattccggccgttcggtcatcgtggtcggcccg
gaactgaagctgcaccagtgcggcctgcccaagaagatggcgctggaactgttcaagccg
ttcatctattccaagctggaaaaatacggtcacgccaccaccatcaaggcggccaagcgc
atggtggaaaaggaacgtcccgaagtgtgggatatccttgaagaggtgatccgtgagcat
cccgtcatgctcaaccgtgcgccgacgctgcaccgtctgggcatccaggcgttcgagccg
gtactgatcgaaggcaaggccatccagctgcacccgctggtctgcaccgcgttcaacgcg
gacttcgatggggaccagatggccgtgcatgtgccgctgagccttgaggcccagctggaa
gcgcgcgtgctgatgatgtcgaccaacaacatcctcagccccgccaacggcaagcccatc
atcgtgccgtcacaggatatcgtgctggggctgtactatctcagcctcgagacgccggaa
ttccgcgcgacaccggaccagaacagctacgatgacaagggtcatctgacggttgcgggc
gcgccgtccttctccagcgtgggggaagtggaatacgcgctcagcaccggcgcggtgaag
ctgcatgacaagatccgcgcccggatcgagacgcttgacgctgacggcaagccggcgcgt
acgacggtggtcacgacgccgggccgcatgctggttgcccagatcctgccccgtcatgcg
gcgctgccgttctcgctgatcaaccggcaactgaccaagaagatcgtctccgacgtgatc
gacgcggtctaccgtcactgcggccagaaggaatgcgtgatcttctgtgaccgcctgatg
ggccttggtttccgccatgcggcgaagtcgggcatttccttcggcaaggacgacatgatc
gtcccggccgagaagaaggaactggttgaccgcaccgccgcggaagtgaaggagttcgag
cagcagtaccaggacggcctgatcacggctggcgagcgctacaacaaggtggtcgatgcc
tggtcgcgctgcacggacgaagtgcaggcggcgatgatgaaggagatttccaagcaggaa
atcggcaagcccaccaactcggtgtggatgatgagccactccggtgcccgtgggtcgcca
gcgcagatgaagcagctggccggcatgcgtggcctgatggccaagccgtcgggtgagatc
atcgaacagccgatcatcgccaacttcaaggaaggcctgtcggttctcgattacttcacc
tccagccatggtgcgcgtaagggtctggccgacaccgcgctcaagaccgcgaactcgggt
tatcttacccggcgtctggtcgacgtggcgcaggacagcatcattgtcgaggaagactgc
ggtaccgaacgcggcctgaccgtgcgcgcggtcatggacgggggcgaggttatcgcatcg
ctgtccgagcgtatgctcgggcgcacgctggcggctgatgtgcttgatcccgccacgggc
aaggtgctcttcccgcgcaatacgctgatcgaggaagcccaggccgagcagatcgagaag
gcgggggtcgaaagcctgctgatccgctccgtcctgacctgcgacagccgcgttggcgta
tgcggtcactgctatggccgtgacctggcccgtggcacgcccgtcaatatcggtgaggcc
gtgggcgtgatcgccgcccagtccattggtgagccgggcacgcagctgaccatgcgtacc
ttccatatcggcggtgcggcgcagcgtggcgccgagcagtcgatggtcgaggcatcgcgt
gacggcaaggtgacgatccgcaacaagaacgtggtgcataacagccagaacgtgcccatc
gtcatgtcgcgtaactgcgagatcctgctgacggatgaccgtggaaccgagcgcgcccgc
taccgtgtgccctatggtgcccgcctgctggtggaggatggtgctgcggtcacccgtggg
cagaagatggccgagtgggatccgtacaccctgccgatcatcaccgagcagcccggcaag
gtggaatatcttgacctgatcgactccatcaccctggtggagcggatggatgaggtgacc
ggcctgacctccaaggtggtggttgactacaagcaggcttccaaggggatcgacctgcgg
ccgcgcctgcagctcaaggacgccaatggcgatgtggtgaagctggccaacggcaacgat
gcccgctacttcctctcgcctgactcgctgctgtcggttgagaacggtgcgcaggtgaat
gcgggtgacgtgctggcccgtatcccgcgtgaaggctccaagacgcgtgacattaccggt
ggtctgccgcgcgtggccgaactgttcgaggcccgtcgcccgaaggatcacgccatcatc
tcggaaaccgaggggcgtgtggaattcggcaaggattacaagtccaagcggcgtgtcatc
gtcaagaacgacgagaccggcgaggagacggattacctgatccccaagggcaagcatgtg
tccgtgcaggaaggcgacttcgtgcaggtgggcgatccgctggtcgatggtccgcgcgtg
ccgcatgacatcctgaaggttctgggtgtcgaggcgctgtcggattatctggtcaacgaa
atccaggacgtctaccgcctgcagggcgtgaagatcaatgacaagcacatcgaagtcatt
gtgcgccagatgctgcagaaggtggaaatccttgagccgggcgatacgacctacctgatc
ggtgagacggtggaccgtatcgaatacgaggaagaaaacaccaagcgcctgaacatgggc
gagcgtccggctgctgccatgcctgtgctgcagggcatcaccaaggcctcgctgcagacg
cagtccttcatctccgccgcatccttccaggagacgacacgtgtcctgaccgaggctgcc
acggcagggaagaaggatacgctcaacggcctgaaggagaacgtgattgtcggccgcctg
atcccggcggggacgggcagcgtcatgaacaagctccgtgccgttgcggcaggtgaggac
aagcagcgcctggcccaggcccgcgctgcggtggccacaaccaaggccgctgaataa
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integrated database retrieval system
